Gene : Phvul.001G179300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24221:SF119 - ABC TRANSPORTER B FAMILY MEMBER 1 Genomic Order:  1772
Name:  ? Phvul.001G179300 Secondary Identifier:  ? PAC:37171204
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G179300 0.5kb upstream 0.5kb upstream 7148 true Chr01: 43702520-43709667 Phaseolus vulgaris
Phvul.001G179300 0.5kb upstream 0.5kb upstream 500 false Chr01: 43709168-43709667 Phaseolus vulgaris
Phvul.001G179300 0.5kb downstream 0.5kb downstream 7148 true Chr01: 43702020-43709167 Phaseolus vulgaris
Phvul.001G179300 0.5kb downstream 0.5kb downstream 500 false Chr01: 43702020-43702519 Phaseolus vulgaris
Phvul.001G179300 1.0kb upstream 1.0kb upstream 7648 true Chr01: 43702520-43710167 Phaseolus vulgaris
Phvul.001G179300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43709168-43710167 Phaseolus vulgaris
Phvul.001G179300 1.0kb downstream 1.0kb downstream 7648 true Chr01: 43701520-43709167 Phaseolus vulgaris
Phvul.001G179300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43701520-43702519 Phaseolus vulgaris
Phvul.001G179300 2.0kb upstream 2.0kb upstream 8648 true Chr01: 43702520-43711167 Phaseolus vulgaris
Phvul.001G179300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43709168-43711167 Phaseolus vulgaris
Phvul.001G179300 2.0kb downstream 2.0kb downstream 8648 true Chr01: 43700520-43709167 Phaseolus vulgaris
Phvul.001G179300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43700520-43702519 Phaseolus vulgaris
Phvul.001G179300 5.0kb upstream 5.0kb upstream 11648 true Chr01: 43702520-43714167 Phaseolus vulgaris
Phvul.001G179300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43709168-43714167 Phaseolus vulgaris
Phvul.001G179300 5.0kb downstream 5.0kb downstream 11648 true Chr01: 43697520-43709167 Phaseolus vulgaris
Phvul.001G179300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43697520-43702519 Phaseolus vulgaris
Phvul.001G179300 10.0kb upstream 10.0kb upstream 16648 true Chr01: 43702520-43719167 Phaseolus vulgaris
Phvul.001G179300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43709168-43719167 Phaseolus vulgaris
Phvul.001G179300 10.0kb downstream 10.0kb downstream 16648 true Chr01: 43692520-43709167 Phaseolus vulgaris
Phvul.001G179300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43692520-43702519 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309077 5265 Fabidae View MSA
124068120 5270 Rosid View MSA
123742106 5271 Pentapetalae View MSA
122796466 5272 Eudicot View MSA
122044866 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350880 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7418 0.0 30.4634   Low
cufflinks 28.6404 0.0 79.0328    
cufflinks 11.5365 0.0 29.9369   Low
cufflinks 26.086 0.0 70.8787    
cufflinks 37.4585 0.0 105.84 High High
cufflinks 25.0644 0.0 68.2774    
cufflinks 22.211 0.0 59.8795    
cufflinks 16.7125 0.0 44.1362    
cufflinks 18.2884 0.0 48.5115    
cufflinks 8.73513 0.0 22.5787   Low
cufflinks 32.0237 0.0 89.0608   High

0 Strain