Gene : Phvul.001G180000 P. vulgaris v2.1
Defline:  (1 of 1) K15691 - E3 ubiquitin-protein ligase RFWD3 [EC:6.3.2.19] (RFWD3) Genomic Order:  1779
Name:  ? Phvul.001G180000 Secondary Identifier:  ? PAC:37168346
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G180000 0.5kb upstream 0.5kb upstream 5939 true Chr01: 43787571-43793509 Phaseolus vulgaris
Phvul.001G180000 0.5kb upstream 0.5kb upstream 500 false Chr01: 43793010-43793509 Phaseolus vulgaris
Phvul.001G180000 0.5kb downstream 0.5kb downstream 5939 true Chr01: 43787071-43793009 Phaseolus vulgaris
Phvul.001G180000 0.5kb downstream 0.5kb downstream 500 false Chr01: 43787071-43787570 Phaseolus vulgaris
Phvul.001G180000 1.0kb upstream 1.0kb upstream 6439 true Chr01: 43787571-43794009 Phaseolus vulgaris
Phvul.001G180000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43793010-43794009 Phaseolus vulgaris
Phvul.001G180000 1.0kb downstream 1.0kb downstream 6439 true Chr01: 43786571-43793009 Phaseolus vulgaris
Phvul.001G180000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43786571-43787570 Phaseolus vulgaris
Phvul.001G180000 2.0kb upstream 2.0kb upstream 7439 true Chr01: 43787571-43795009 Phaseolus vulgaris
Phvul.001G180000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43793010-43795009 Phaseolus vulgaris
Phvul.001G180000 2.0kb downstream 2.0kb downstream 7439 true Chr01: 43785571-43793009 Phaseolus vulgaris
Phvul.001G180000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43785571-43787570 Phaseolus vulgaris
Phvul.001G180000 5.0kb upstream 5.0kb upstream 10439 true Chr01: 43787571-43798009 Phaseolus vulgaris
Phvul.001G180000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43793010-43798009 Phaseolus vulgaris
Phvul.001G180000 5.0kb downstream 5.0kb downstream 10439 true Chr01: 43782571-43793009 Phaseolus vulgaris
Phvul.001G180000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43782571-43787570 Phaseolus vulgaris
Phvul.001G180000 10.0kb upstream 10.0kb upstream 15439 true Chr01: 43787571-43803009 Phaseolus vulgaris
Phvul.001G180000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43793010-43803009 Phaseolus vulgaris
Phvul.001G180000 10.0kb downstream 10.0kb downstream 15439 true Chr01: 43777571-43793009 Phaseolus vulgaris
Phvul.001G180000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43777571-43787570 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306086 5265 Fabidae View MSA
124062474 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.63938 0.0 5.1995    
cufflinks 3.69599 0.0 10.6789    
cufflinks 3.14437 0.0 9.25841    
cufflinks 2.33602 0.0 7.13421    
cufflinks 2.97298 0.0 8.84765    
cufflinks 3.84743 0.0 11.0647    
cufflinks 11.1098 0.0 29.1978    
cufflinks 77.8039 0.0 218.312 High High
cufflinks 2.27709 0.0 6.93814    
cufflinks 3.66108 0.0 10.6114    
cufflinks 3.14637 0.0 9.28527    

0 Strain