Gene : Phvul.001G165600 P. vulgaris v2.1
Defline:  (1 of 2) 4.1.1.25 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase Genomic Order:  1633
Name:  ? Phvul.001G165600 Secondary Identifier:  ? PAC:37169805
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6802 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G165600 0.5kb upstream 0.5kb upstream 17577 true Chr01: 41992909-42010485 Phaseolus vulgaris
Phvul.001G165600 0.5kb upstream 0.5kb upstream 500 false Chr01: 41992909-41993408 Phaseolus vulgaris
Phvul.001G165600 0.5kb downstream 0.5kb downstream 17577 true Chr01: 41993409-42010985 Phaseolus vulgaris
Phvul.001G165600 0.5kb downstream 0.5kb downstream 500 false Chr01: 42010486-42010985 Phaseolus vulgaris
Phvul.001G165600 1.0kb upstream 1.0kb upstream 18077 true Chr01: 41992409-42010485 Phaseolus vulgaris
Phvul.001G165600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41992409-41993408 Phaseolus vulgaris
Phvul.001G165600 1.0kb downstream 1.0kb downstream 18077 true Chr01: 41993409-42011485 Phaseolus vulgaris
Phvul.001G165600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42010486-42011485 Phaseolus vulgaris
Phvul.001G165600 2.0kb upstream 2.0kb upstream 19077 true Chr01: 41991409-42010485 Phaseolus vulgaris
Phvul.001G165600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41991409-41993408 Phaseolus vulgaris
Phvul.001G165600 2.0kb downstream 2.0kb downstream 19077 true Chr01: 41993409-42012485 Phaseolus vulgaris
Phvul.001G165600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42010486-42012485 Phaseolus vulgaris
Phvul.001G165600 5.0kb upstream 5.0kb upstream 22077 true Chr01: 41988409-42010485 Phaseolus vulgaris
Phvul.001G165600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41988409-41993408 Phaseolus vulgaris
Phvul.001G165600 5.0kb downstream 5.0kb downstream 22077 true Chr01: 41993409-42015485 Phaseolus vulgaris
Phvul.001G165600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42010486-42015485 Phaseolus vulgaris
Phvul.001G165600 10.0kb upstream 10.0kb upstream 27077 true Chr01: 41983409-42010485 Phaseolus vulgaris
Phvul.001G165600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41983409-41993408 Phaseolus vulgaris
Phvul.001G165600 10.0kb downstream 10.0kb downstream 27077 true Chr01: 41993409-42020485 Phaseolus vulgaris
Phvul.001G165600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42010486-42020485 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303327 5265 Fabidae View MSA
124063547 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.40878 0.0 4.71403    
cufflinks 2.27081 0.0 7.20786    
cufflinks 20.6886 0.0 53.6978   High
cufflinks 1.1721 0.0 4.03337    
cufflinks 2.4982 0.0 7.88584    
cufflinks 9.32555 0.0 25.4934   High
cufflinks 0.0963588 0.0 0.410242 Low Low
cufflinks 0.271772 0.0 1.05876 Low Low
cufflinks 0.317972 0.0 1.23053 Low  
cufflinks 2.17926 0.0 6.94609    
cufflinks 1.72523 0.0 5.68034    

0 Strain