Gene : Phvul.001G159900 P. vulgaris v2.1
Defline:  (1 of 2) K17907 - autophagy-related protein 9 (ATG9) Genomic Order:  1575
Name:  ? Phvul.001G159900 Secondary Identifier:  ? PAC:37169630
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G159900 0.5kb upstream 0.5kb upstream 7914 true Chr01: 41311408-41319321 Phaseolus vulgaris
Phvul.001G159900 0.5kb upstream 0.5kb upstream 500 false Chr01: 41311408-41311907 Phaseolus vulgaris
Phvul.001G159900 0.5kb downstream 0.5kb downstream 7914 true Chr01: 41311908-41319821 Phaseolus vulgaris
Phvul.001G159900 0.5kb downstream 0.5kb downstream 500 false Chr01: 41319322-41319821 Phaseolus vulgaris
Phvul.001G159900 1.0kb upstream 1.0kb upstream 8414 true Chr01: 41310908-41319321 Phaseolus vulgaris
Phvul.001G159900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41310908-41311907 Phaseolus vulgaris
Phvul.001G159900 1.0kb downstream 1.0kb downstream 8414 true Chr01: 41311908-41320321 Phaseolus vulgaris
Phvul.001G159900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41319322-41320321 Phaseolus vulgaris
Phvul.001G159900 2.0kb upstream 2.0kb upstream 9414 true Chr01: 41309908-41319321 Phaseolus vulgaris
Phvul.001G159900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41309908-41311907 Phaseolus vulgaris
Phvul.001G159900 2.0kb downstream 2.0kb downstream 9414 true Chr01: 41311908-41321321 Phaseolus vulgaris
Phvul.001G159900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41319322-41321321 Phaseolus vulgaris
Phvul.001G159900 5.0kb upstream 5.0kb upstream 12414 true Chr01: 41306908-41319321 Phaseolus vulgaris
Phvul.001G159900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41306908-41311907 Phaseolus vulgaris
Phvul.001G159900 5.0kb downstream 5.0kb downstream 12414 true Chr01: 41311908-41324321 Phaseolus vulgaris
Phvul.001G159900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41319322-41324321 Phaseolus vulgaris
Phvul.001G159900 10.0kb upstream 10.0kb upstream 17414 true Chr01: 41301908-41319321 Phaseolus vulgaris
Phvul.001G159900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41301908-41311907 Phaseolus vulgaris
Phvul.001G159900 10.0kb downstream 10.0kb downstream 17414 true Chr01: 41311908-41329321 Phaseolus vulgaris
Phvul.001G159900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41319322-41329321 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1313 0.0 45.9775   High
cufflinks 7.25266 0.0 31.4649    
cufflinks 7.69265 0.0 31.1277    
cufflinks 4.48794 0.0 18.6883   Low
cufflinks 7.01704 0.0 31.5638    
cufflinks 7.06973 0.0 28.9119    
cufflinks 10.4611 0.0 36.3336   High
cufflinks 8.22642 0.0 36.1897    
cufflinks 9.32242 0.0 45.6483    
cufflinks 11.0876 0.0 46.5739   High
cufflinks 5.36975 0.0 20.8215   Low

0 Strain