Gene : Phvul.001G165266 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10795:SF350 - SUBTILISIN-LIKE PROTEASE SDD1 Genomic Order:  1629
Name:  ? Phvul.001G165266 Secondary Identifier:  ? PAC:37168379
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G165266 0.5kb upstream 0.5kb upstream 3043 true Chr01: 41940062-41943104 Phaseolus vulgaris
Phvul.001G165266 0.5kb upstream 0.5kb upstream 500 false Chr01: 41942605-41943104 Phaseolus vulgaris
Phvul.001G165266 0.5kb downstream 0.5kb downstream 3043 true Chr01: 41939562-41942604 Phaseolus vulgaris
Phvul.001G165266 0.5kb downstream 0.5kb downstream 500 false Chr01: 41939562-41940061 Phaseolus vulgaris
Phvul.001G165266 1.0kb upstream 1.0kb upstream 3543 true Chr01: 41940062-41943604 Phaseolus vulgaris
Phvul.001G165266 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41942605-41943604 Phaseolus vulgaris
Phvul.001G165266 1.0kb downstream 1.0kb downstream 3543 true Chr01: 41939062-41942604 Phaseolus vulgaris
Phvul.001G165266 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41939062-41940061 Phaseolus vulgaris
Phvul.001G165266 2.0kb upstream 2.0kb upstream 4543 true Chr01: 41940062-41944604 Phaseolus vulgaris
Phvul.001G165266 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41942605-41944604 Phaseolus vulgaris
Phvul.001G165266 2.0kb downstream 2.0kb downstream 4543 true Chr01: 41938062-41942604 Phaseolus vulgaris
Phvul.001G165266 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41938062-41940061 Phaseolus vulgaris
Phvul.001G165266 5.0kb upstream 5.0kb upstream 7543 true Chr01: 41940062-41947604 Phaseolus vulgaris
Phvul.001G165266 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41942605-41947604 Phaseolus vulgaris
Phvul.001G165266 5.0kb downstream 5.0kb downstream 7543 true Chr01: 41935062-41942604 Phaseolus vulgaris
Phvul.001G165266 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41935062-41940061 Phaseolus vulgaris
Phvul.001G165266 10.0kb upstream 10.0kb upstream 12543 true Chr01: 41940062-41952604 Phaseolus vulgaris
Phvul.001G165266 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41942605-41952604 Phaseolus vulgaris
Phvul.001G165266 10.0kb downstream 10.0kb downstream 12543 true Chr01: 41930062-41942604 Phaseolus vulgaris
Phvul.001G165266 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41930062-41940061 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311974 5265 Fabidae View MSA
124074709 5270 Rosid View MSA
123751509 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0327473 0.0 0.144755 Low Low
cufflinks 1.33204 0.0 4.1677    
cufflinks 5.26537 0.0 14.2805   High
cufflinks 0.0209141 0.0 0.0971489 Low Low
cufflinks 0.384791 0.0 1.38325 Low  
cufflinks 9.89297 0.0 25.7589   High
cufflinks 0.372229 0.0 1.33456 Low  
cufflinks 0.459718 0.0 1.61476    
cufflinks 0.331123 0.0 1.20173 Low  
cufflinks 0.0395864 0.0 0.171799 Low Low
cufflinks 0.479145 0.0 1.68391 Low  

0 Strain