Gene : Phvul.001G155400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23050//PTHR23050:SF211 - CALCIUM BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1531
Name:  ? Phvul.001G155400 Secondary Identifier:  ? PAC:37170624
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G155400 0.5kb upstream 0.5kb upstream 1315 true Chr01: 40649942-40651256 Phaseolus vulgaris
Phvul.001G155400 0.5kb upstream 0.5kb upstream 500 false Chr01: 40650757-40651256 Phaseolus vulgaris
Phvul.001G155400 0.5kb downstream 0.5kb downstream 1315 true Chr01: 40649442-40650756 Phaseolus vulgaris
Phvul.001G155400 0.5kb downstream 0.5kb downstream 500 false Chr01: 40649442-40649941 Phaseolus vulgaris
Phvul.001G155400 1.0kb upstream 1.0kb upstream 1815 true Chr01: 40649942-40651756 Phaseolus vulgaris
Phvul.001G155400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40650757-40651756 Phaseolus vulgaris
Phvul.001G155400 1.0kb downstream 1.0kb downstream 1815 true Chr01: 40648942-40650756 Phaseolus vulgaris
Phvul.001G155400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40648942-40649941 Phaseolus vulgaris
Phvul.001G155400 2.0kb upstream 2.0kb upstream 2815 true Chr01: 40649942-40652756 Phaseolus vulgaris
Phvul.001G155400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40650757-40652756 Phaseolus vulgaris
Phvul.001G155400 2.0kb downstream 2.0kb downstream 2815 true Chr01: 40647942-40650756 Phaseolus vulgaris
Phvul.001G155400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40647942-40649941 Phaseolus vulgaris
Phvul.001G155400 5.0kb upstream 5.0kb upstream 5815 true Chr01: 40649942-40655756 Phaseolus vulgaris
Phvul.001G155400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40650757-40655756 Phaseolus vulgaris
Phvul.001G155400 5.0kb downstream 5.0kb downstream 5815 true Chr01: 40644942-40650756 Phaseolus vulgaris
Phvul.001G155400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40644942-40649941 Phaseolus vulgaris
Phvul.001G155400 10.0kb upstream 10.0kb upstream 10815 true Chr01: 40649942-40660756 Phaseolus vulgaris
Phvul.001G155400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40650757-40660756 Phaseolus vulgaris
Phvul.001G155400 10.0kb downstream 10.0kb downstream 10815 true Chr01: 40639942-40650756 Phaseolus vulgaris
Phvul.001G155400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40639942-40649941 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779373 5273 Angiosperm View MSA
122299319 5265 Fabidae View MSA
124070744 5270 Rosid View MSA
123742543 5271 Pentapetalae View MSA
122770310 5272 Eudicot View MSA
121051039 5274 Embryophyte View MSA
123091145 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.78406 0.0 9.99839    
cufflinks 0.685606 0.0 2.76737    
cufflinks 0.272763 0.0 1.18883 Low  
cufflinks 1.55623 0.0 5.90981    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.513178 0.0 2.11656 Low  
cufflinks 15.3344 0.0 45.6467   High
cufflinks 7.174 0.0 23.1711    
cufflinks 15.29 0.0 45.6361   High
cufflinks 0.0442335 0.0 0.2366 Low Low
cufflinks 0.867642 0.0 3.4569    

0 Strain