Gene : Phvul.001G141800 P. vulgaris v2.1
Defline:  (1 of 2) PF08743 - Nse4 C-terminal (Nse4_C) Genomic Order:  1394
Name:  ? Phvul.001G141800 Secondary Identifier:  ? PAC:37168306
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G141800 0.5kb upstream 0.5kb upstream 2727 true Chr01: 38470371-38473097 Phaseolus vulgaris
Phvul.001G141800 0.5kb upstream 0.5kb upstream 500 false Chr01: 38470371-38470870 Phaseolus vulgaris
Phvul.001G141800 0.5kb downstream 0.5kb downstream 2727 true Chr01: 38470871-38473597 Phaseolus vulgaris
Phvul.001G141800 0.5kb downstream 0.5kb downstream 500 false Chr01: 38473098-38473597 Phaseolus vulgaris
Phvul.001G141800 1.0kb upstream 1.0kb upstream 3227 true Chr01: 38469871-38473097 Phaseolus vulgaris
Phvul.001G141800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38469871-38470870 Phaseolus vulgaris
Phvul.001G141800 1.0kb downstream 1.0kb downstream 3227 true Chr01: 38470871-38474097 Phaseolus vulgaris
Phvul.001G141800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38473098-38474097 Phaseolus vulgaris
Phvul.001G141800 2.0kb upstream 2.0kb upstream 4227 true Chr01: 38468871-38473097 Phaseolus vulgaris
Phvul.001G141800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38468871-38470870 Phaseolus vulgaris
Phvul.001G141800 2.0kb downstream 2.0kb downstream 4227 true Chr01: 38470871-38475097 Phaseolus vulgaris
Phvul.001G141800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38473098-38475097 Phaseolus vulgaris
Phvul.001G141800 5.0kb upstream 5.0kb upstream 7227 true Chr01: 38465871-38473097 Phaseolus vulgaris
Phvul.001G141800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38465871-38470870 Phaseolus vulgaris
Phvul.001G141800 5.0kb downstream 5.0kb downstream 7227 true Chr01: 38470871-38478097 Phaseolus vulgaris
Phvul.001G141800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38473098-38478097 Phaseolus vulgaris
Phvul.001G141800 10.0kb upstream 10.0kb upstream 12227 true Chr01: 38460871-38473097 Phaseolus vulgaris
Phvul.001G141800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38460871-38470870 Phaseolus vulgaris
Phvul.001G141800 10.0kb downstream 10.0kb downstream 12227 true Chr01: 38470871-38483097 Phaseolus vulgaris
Phvul.001G141800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38473098-38483097 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309618 5265 Fabidae View MSA
124070075 5270 Rosid View MSA
123747962 5271 Pentapetalae View MSA
122793690 5272 Eudicot View MSA
122042819 5273 Angiosperm View MSA
121349826 5274 Embryophyte View MSA
123428670 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0924749 0.0 0.428695 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0969044 0.0 0.450135 Low  
cufflinks 0.0884111 0.0 0.415139 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.038404 0.0 0.194449 Low Low
cufflinks 0.0591986 0.0 0.287537 Low  
cufflinks 0.052709 0.0 0.260173 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain