Gene : Phvul.001G148800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13018:SF29 - ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN Genomic Order:  1463
Name:  ? Phvul.001G148800 Secondary Identifier:  ? PAC:37169846
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G148800 0.5kb upstream 0.5kb upstream 10320 true Chr01: 39567137-39577456 Phaseolus vulgaris
Phvul.001G148800 0.5kb upstream 0.5kb upstream 500 false Chr01: 39576957-39577456 Phaseolus vulgaris
Phvul.001G148800 0.5kb downstream 0.5kb downstream 10320 true Chr01: 39566637-39576956 Phaseolus vulgaris
Phvul.001G148800 0.5kb downstream 0.5kb downstream 500 false Chr01: 39566637-39567136 Phaseolus vulgaris
Phvul.001G148800 1.0kb upstream 1.0kb upstream 10820 true Chr01: 39567137-39577956 Phaseolus vulgaris
Phvul.001G148800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39576957-39577956 Phaseolus vulgaris
Phvul.001G148800 1.0kb downstream 1.0kb downstream 10820 true Chr01: 39566137-39576956 Phaseolus vulgaris
Phvul.001G148800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39566137-39567136 Phaseolus vulgaris
Phvul.001G148800 2.0kb upstream 2.0kb upstream 11820 true Chr01: 39567137-39578956 Phaseolus vulgaris
Phvul.001G148800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39576957-39578956 Phaseolus vulgaris
Phvul.001G148800 2.0kb downstream 2.0kb downstream 11820 true Chr01: 39565137-39576956 Phaseolus vulgaris
Phvul.001G148800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39565137-39567136 Phaseolus vulgaris
Phvul.001G148800 5.0kb upstream 5.0kb upstream 14820 true Chr01: 39567137-39581956 Phaseolus vulgaris
Phvul.001G148800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39576957-39581956 Phaseolus vulgaris
Phvul.001G148800 5.0kb downstream 5.0kb downstream 14820 true Chr01: 39562137-39576956 Phaseolus vulgaris
Phvul.001G148800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39562137-39567136 Phaseolus vulgaris
Phvul.001G148800 10.0kb upstream 10.0kb upstream 19820 true Chr01: 39567137-39586956 Phaseolus vulgaris
Phvul.001G148800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39576957-39586956 Phaseolus vulgaris
Phvul.001G148800 10.0kb downstream 10.0kb downstream 19820 true Chr01: 39557137-39576956 Phaseolus vulgaris
Phvul.001G148800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39557137-39567136 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041233 5273 Angiosperm View MSA
122306549 5265 Fabidae View MSA
124065470 5270 Rosid View MSA
123741860 5271 Pentapetalae View MSA
122788440 5272 Eudicot View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0401574 0.0 0.179061 Low Low
cufflinks 0.0387985 0.0 0.175269 Low Low
cufflinks 0.211489 0.0 1.04343 Low  
cufflinks 0.343817 0.0 1.6156 Low High
cufflinks 0.169019 0.0 0.666968 Low  
cufflinks 0.160141 0.0 0.632051 Low  
cufflinks 0.0770135 0.0 0.32332 Low  
cufflinks 0.220716 0.0 1.5131 Low  
cufflinks 0.0684896 0.0 0.292555 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0860377 0.0 0.360611 Low  

0 Strain