Gene : Phvul.001G123100 P. vulgaris v2.1
Defline:  (1 of 1) K02470 - DNA gyrase subunit B [EC:5.99.1.3] (gyrB) Genomic Order:  1200
Name:  ? Phvul.001G123100 Secondary Identifier:  ? PAC:37169069
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G123100 0.5kb upstream 0.5kb upstream 17448 true Chr01: 33928070-33945517 Phaseolus vulgaris
Phvul.001G123100 0.5kb upstream 0.5kb upstream 500 false Chr01: 33945018-33945517 Phaseolus vulgaris
Phvul.001G123100 0.5kb downstream 0.5kb downstream 17448 true Chr01: 33927570-33945017 Phaseolus vulgaris
Phvul.001G123100 0.5kb downstream 0.5kb downstream 500 false Chr01: 33927570-33928069 Phaseolus vulgaris
Phvul.001G123100 1.0kb upstream 1.0kb upstream 17948 true Chr01: 33928070-33946017 Phaseolus vulgaris
Phvul.001G123100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33945018-33946017 Phaseolus vulgaris
Phvul.001G123100 1.0kb downstream 1.0kb downstream 17948 true Chr01: 33927070-33945017 Phaseolus vulgaris
Phvul.001G123100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33927070-33928069 Phaseolus vulgaris
Phvul.001G123100 2.0kb upstream 2.0kb upstream 18948 true Chr01: 33928070-33947017 Phaseolus vulgaris
Phvul.001G123100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33945018-33947017 Phaseolus vulgaris
Phvul.001G123100 2.0kb downstream 2.0kb downstream 18948 true Chr01: 33926070-33945017 Phaseolus vulgaris
Phvul.001G123100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33926070-33928069 Phaseolus vulgaris
Phvul.001G123100 5.0kb upstream 5.0kb upstream 21948 true Chr01: 33928070-33950017 Phaseolus vulgaris
Phvul.001G123100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33945018-33950017 Phaseolus vulgaris
Phvul.001G123100 5.0kb downstream 5.0kb downstream 21948 true Chr01: 33923070-33945017 Phaseolus vulgaris
Phvul.001G123100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33923070-33928069 Phaseolus vulgaris
Phvul.001G123100 10.0kb upstream 10.0kb upstream 26948 true Chr01: 33928070-33955017 Phaseolus vulgaris
Phvul.001G123100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33945018-33955017 Phaseolus vulgaris
Phvul.001G123100 10.0kb downstream 10.0kb downstream 26948 true Chr01: 33918070-33945017 Phaseolus vulgaris
Phvul.001G123100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33918070-33928069 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300478 5265 Fabidae View MSA
124066997 5270 Rosid View MSA
123739357 5271 Pentapetalae View MSA
122792623 5272 Eudicot View MSA
122042515 5273 Angiosperm View MSA
121346191 5274 Embryophyte View MSA
123426426 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.70338 0.0 18.1328   Low
cufflinks 9.48332 0.0 32.1368    
cufflinks 19.8159 0.0 66.5953   High
cufflinks 4.8693 0.0 19.1215   Low
cufflinks 7.10346 0.0 25.7548    
cufflinks 14.8293 0.0 49.3049   High
cufflinks 8.68667 0.0 29.855    
cufflinks 9.39367 0.0 31.9196    
cufflinks 8.43109 0.0 29.5548    
cufflinks 6.72744 0.0 24.2152    
cufflinks 6.23296 0.0 23.1798    

0 Strain