Gene : Phvul.001G127000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33923:SF3 - CALMODULIN-BINDING PROTEIN Genomic Order:  1240
Name:  ? Phvul.001G127000 Secondary Identifier:  ? PAC:37168584
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G127000 0.5kb upstream 0.5kb upstream 4932 true Chr01: 35303576-35308507 Phaseolus vulgaris
Phvul.001G127000 0.5kb upstream 0.5kb upstream 500 false Chr01: 35303576-35304075 Phaseolus vulgaris
Phvul.001G127000 0.5kb downstream 0.5kb downstream 4932 true Chr01: 35304076-35309007 Phaseolus vulgaris
Phvul.001G127000 0.5kb downstream 0.5kb downstream 500 false Chr01: 35308508-35309007 Phaseolus vulgaris
Phvul.001G127000 1.0kb upstream 1.0kb upstream 5432 true Chr01: 35303076-35308507 Phaseolus vulgaris
Phvul.001G127000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35303076-35304075 Phaseolus vulgaris
Phvul.001G127000 1.0kb downstream 1.0kb downstream 5432 true Chr01: 35304076-35309507 Phaseolus vulgaris
Phvul.001G127000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35308508-35309507 Phaseolus vulgaris
Phvul.001G127000 2.0kb upstream 2.0kb upstream 6432 true Chr01: 35302076-35308507 Phaseolus vulgaris
Phvul.001G127000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35302076-35304075 Phaseolus vulgaris
Phvul.001G127000 2.0kb downstream 2.0kb downstream 6432 true Chr01: 35304076-35310507 Phaseolus vulgaris
Phvul.001G127000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35308508-35310507 Phaseolus vulgaris
Phvul.001G127000 5.0kb upstream 5.0kb upstream 9432 true Chr01: 35299076-35308507 Phaseolus vulgaris
Phvul.001G127000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35299076-35304075 Phaseolus vulgaris
Phvul.001G127000 5.0kb downstream 5.0kb downstream 9432 true Chr01: 35304076-35313507 Phaseolus vulgaris
Phvul.001G127000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35308508-35313507 Phaseolus vulgaris
Phvul.001G127000 10.0kb upstream 10.0kb upstream 14432 true Chr01: 35294076-35308507 Phaseolus vulgaris
Phvul.001G127000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35294076-35304075 Phaseolus vulgaris
Phvul.001G127000 10.0kb downstream 10.0kb downstream 14432 true Chr01: 35304076-35318507 Phaseolus vulgaris
Phvul.001G127000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35308508-35318507 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312016 5265 Fabidae View MSA
124070839 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56573 0.0 4.60585   Low
cufflinks 2.05943 0.0 5.88218    
cufflinks 5.19212 0.0 13.6758   High
cufflinks 2.00633 0.0 5.79286    
cufflinks 2.04672 0.0 5.92169    
cufflinks 5.31698 0.0 14.0092   High
cufflinks 3.42404 0.0 9.3093    
cufflinks 2.57096 0.0 7.13608    
cufflinks 4.56188 0.0 12.1274    
cufflinks 5.39298 0.0 14.2397   High
cufflinks 1.94222 0.0 5.62263    

0 Strain