Gene : Phvul.001G124500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11106//PTHR11106:SF64 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1215
Name:  ? Phvul.001G124500 Secondary Identifier:  ? PAC:37169958
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G124500 0.5kb upstream 0.5kb upstream 2542 true Chr01: 34461137-34463678 Phaseolus vulgaris
Phvul.001G124500 0.5kb upstream 0.5kb upstream 500 false Chr01: 34461137-34461636 Phaseolus vulgaris
Phvul.001G124500 0.5kb downstream 0.5kb downstream 2542 true Chr01: 34461637-34464178 Phaseolus vulgaris
Phvul.001G124500 0.5kb downstream 0.5kb downstream 500 false Chr01: 34463679-34464178 Phaseolus vulgaris
Phvul.001G124500 1.0kb upstream 1.0kb upstream 3042 true Chr01: 34460637-34463678 Phaseolus vulgaris
Phvul.001G124500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34460637-34461636 Phaseolus vulgaris
Phvul.001G124500 1.0kb downstream 1.0kb downstream 3042 true Chr01: 34461637-34464678 Phaseolus vulgaris
Phvul.001G124500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34463679-34464678 Phaseolus vulgaris
Phvul.001G124500 2.0kb upstream 2.0kb upstream 4042 true Chr01: 34459637-34463678 Phaseolus vulgaris
Phvul.001G124500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34459637-34461636 Phaseolus vulgaris
Phvul.001G124500 2.0kb downstream 2.0kb downstream 4042 true Chr01: 34461637-34465678 Phaseolus vulgaris
Phvul.001G124500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34463679-34465678 Phaseolus vulgaris
Phvul.001G124500 5.0kb upstream 5.0kb upstream 7042 true Chr01: 34456637-34463678 Phaseolus vulgaris
Phvul.001G124500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34456637-34461636 Phaseolus vulgaris
Phvul.001G124500 5.0kb downstream 5.0kb downstream 7042 true Chr01: 34461637-34468678 Phaseolus vulgaris
Phvul.001G124500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34463679-34468678 Phaseolus vulgaris
Phvul.001G124500 10.0kb upstream 10.0kb upstream 12042 true Chr01: 34451637-34463678 Phaseolus vulgaris
Phvul.001G124500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34451637-34461636 Phaseolus vulgaris
Phvul.001G124500 10.0kb downstream 10.0kb downstream 12042 true Chr01: 34461637-34473678 Phaseolus vulgaris
Phvul.001G124500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34463679-34473678 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308852 5265 Fabidae View MSA
124067009 5270 Rosid View MSA
123751139 5271 Pentapetalae View MSA
122792169 5272 Eudicot View MSA
122046817 5273 Angiosperm View MSA
121349496 5274 Embryophyte View MSA
123425593 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.5473 0.0 215.87 High High
cufflinks 47.5731 0.0 122.993 High  
cufflinks 29.0905 0.0 76.2054   Low
cufflinks 47.7234 0.0 123.369 High  
cufflinks 56.1694 0.0 145.25 High  
cufflinks 29.558 0.0 77.4287   Low
cufflinks 34.4048 0.0 89.5317 High  
cufflinks 28.1337 0.0 73.8482 High Low
cufflinks 37.4388 0.0 97.2322 High  
cufflinks 54.8387 0.0 141.8 High  
cufflinks 55.9634 0.0 144.703 High  

0 Strain