Gene : Phvul.001G128000 P. vulgaris v2.1
Defline:  (1 of 3) 1.14.13.39 - Nitric-oxide synthase (NADPH) / NO synthase Genomic Order:  1250
Name:  ? Phvul.001G128000 Secondary Identifier:  ? PAC:37169275
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6845 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G128000 0.5kb upstream 0.5kb upstream 5178 true Chr01: 35501097-35506274 Phaseolus vulgaris
Phvul.001G128000 0.5kb upstream 0.5kb upstream 500 false Chr01: 35505775-35506274 Phaseolus vulgaris
Phvul.001G128000 0.5kb downstream 0.5kb downstream 5178 true Chr01: 35500597-35505774 Phaseolus vulgaris
Phvul.001G128000 0.5kb downstream 0.5kb downstream 500 false Chr01: 35500597-35501096 Phaseolus vulgaris
Phvul.001G128000 1.0kb upstream 1.0kb upstream 5678 true Chr01: 35501097-35506774 Phaseolus vulgaris
Phvul.001G128000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35505775-35506774 Phaseolus vulgaris
Phvul.001G128000 1.0kb downstream 1.0kb downstream 5678 true Chr01: 35500097-35505774 Phaseolus vulgaris
Phvul.001G128000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35500097-35501096 Phaseolus vulgaris
Phvul.001G128000 2.0kb upstream 2.0kb upstream 6678 true Chr01: 35501097-35507774 Phaseolus vulgaris
Phvul.001G128000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35505775-35507774 Phaseolus vulgaris
Phvul.001G128000 2.0kb downstream 2.0kb downstream 6678 true Chr01: 35499097-35505774 Phaseolus vulgaris
Phvul.001G128000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35499097-35501096 Phaseolus vulgaris
Phvul.001G128000 5.0kb upstream 5.0kb upstream 9678 true Chr01: 35501097-35510774 Phaseolus vulgaris
Phvul.001G128000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35505775-35510774 Phaseolus vulgaris
Phvul.001G128000 5.0kb downstream 5.0kb downstream 9678 true Chr01: 35496097-35505774 Phaseolus vulgaris
Phvul.001G128000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35496097-35501096 Phaseolus vulgaris
Phvul.001G128000 10.0kb upstream 10.0kb upstream 14678 true Chr01: 35501097-35515774 Phaseolus vulgaris
Phvul.001G128000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35505775-35515774 Phaseolus vulgaris
Phvul.001G128000 10.0kb downstream 10.0kb downstream 14678 true Chr01: 35491097-35505774 Phaseolus vulgaris
Phvul.001G128000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35491097-35501096 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306597 5265 Fabidae View MSA
124068202 5270 Rosid View MSA
123737776 5271 Pentapetalae View MSA
122786234 5272 Eudicot View MSA
122044948 5273 Angiosperm View MSA
121347878 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.10957 0.0 8.86922    
cufflinks 5.20113 0.0 14.1833    
cufflinks 7.47329 0.0 19.7968   High
cufflinks 2.2649 0.0 6.7763    
cufflinks 3.25792 0.0 9.34273    
cufflinks 9.91946 0.0 25.8707   High
cufflinks 2.63637 0.0 7.64766    
cufflinks 3.10152 0.0 8.83994    
cufflinks 1.58101 0.0 4.87233   Low
cufflinks 5.37941 0.0 14.6459    
cufflinks 3.6223 0.0 10.2353    

0 Strain