Gene : Phvul.001G130000 P. vulgaris v2.1
Defline:  (1 of 3) K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Genomic Order:  1268
Name:  ? Phvul.001G130000 Secondary Identifier:  ? PAC:37170554
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G130000 0.5kb upstream 0.5kb upstream 4113 true Chr01: 36135232-36139344 Phaseolus vulgaris
Phvul.001G130000 0.5kb upstream 0.5kb upstream 500 false Chr01: 36138845-36139344 Phaseolus vulgaris
Phvul.001G130000 0.5kb downstream 0.5kb downstream 4113 true Chr01: 36134732-36138844 Phaseolus vulgaris
Phvul.001G130000 0.5kb downstream 0.5kb downstream 500 false Chr01: 36134732-36135231 Phaseolus vulgaris
Phvul.001G130000 1.0kb upstream 1.0kb upstream 4613 true Chr01: 36135232-36139844 Phaseolus vulgaris
Phvul.001G130000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 36138845-36139844 Phaseolus vulgaris
Phvul.001G130000 1.0kb downstream 1.0kb downstream 4613 true Chr01: 36134232-36138844 Phaseolus vulgaris
Phvul.001G130000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 36134232-36135231 Phaseolus vulgaris
Phvul.001G130000 2.0kb upstream 2.0kb upstream 5613 true Chr01: 36135232-36140844 Phaseolus vulgaris
Phvul.001G130000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 36138845-36140844 Phaseolus vulgaris
Phvul.001G130000 2.0kb downstream 2.0kb downstream 5613 true Chr01: 36133232-36138844 Phaseolus vulgaris
Phvul.001G130000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 36133232-36135231 Phaseolus vulgaris
Phvul.001G130000 5.0kb upstream 5.0kb upstream 8613 true Chr01: 36135232-36143844 Phaseolus vulgaris
Phvul.001G130000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 36138845-36143844 Phaseolus vulgaris
Phvul.001G130000 5.0kb downstream 5.0kb downstream 8613 true Chr01: 36130232-36138844 Phaseolus vulgaris
Phvul.001G130000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 36130232-36135231 Phaseolus vulgaris
Phvul.001G130000 10.0kb upstream 10.0kb upstream 13613 true Chr01: 36135232-36148844 Phaseolus vulgaris
Phvul.001G130000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 36138845-36148844 Phaseolus vulgaris
Phvul.001G130000 10.0kb downstream 10.0kb downstream 13613 true Chr01: 36125232-36138844 Phaseolus vulgaris
Phvul.001G130000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 36125232-36135231 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312488 5265 Fabidae View MSA
124068856 5270 Rosid View MSA
123736384 5271 Pentapetalae View MSA
122797589 5272 Eudicot View MSA
122045994 5273 Angiosperm View MSA
121350308 5274 Embryophyte View MSA
123427568 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.36999 0.0 7.62383   High
cufflinks 2.17024 0.0 7.06189   High
cufflinks 0.531681 0.0 1.99798 Low  
cufflinks 1.58746 0.0 5.33127    
cufflinks 0.745291 0.0 2.71714    
cufflinks 1.39074 0.0 4.76412    
cufflinks 0.394363 0.0 1.50856 Low  
cufflinks 0.787265 0.0 2.84877    
cufflinks 0.227394 0.0 0.908184 Low Low
cufflinks 0.374775 0.0 1.44554   Low
cufflinks 1.23098 0.0 4.26788    

0 Strain