Gene : Phvul.001G115500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31587:SF3 - F1K23.6 Genomic Order:  1092
Name:  ? Phvul.001G115500 Secondary Identifier:  ? PAC:37170452
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G115500 0.5kb upstream 0.5kb upstream 5512 true Chr01: 29538257-29543768 Phaseolus vulgaris
Phvul.001G115500 0.5kb upstream 0.5kb upstream 500 false Chr01: 29538257-29538756 Phaseolus vulgaris
Phvul.001G115500 0.5kb downstream 0.5kb downstream 5512 true Chr01: 29538757-29544268 Phaseolus vulgaris
Phvul.001G115500 0.5kb downstream 0.5kb downstream 500 false Chr01: 29543769-29544268 Phaseolus vulgaris
Phvul.001G115500 1.0kb upstream 1.0kb upstream 6012 true Chr01: 29537757-29543768 Phaseolus vulgaris
Phvul.001G115500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29537757-29538756 Phaseolus vulgaris
Phvul.001G115500 1.0kb downstream 1.0kb downstream 6012 true Chr01: 29538757-29544768 Phaseolus vulgaris
Phvul.001G115500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29543769-29544768 Phaseolus vulgaris
Phvul.001G115500 2.0kb upstream 2.0kb upstream 7012 true Chr01: 29536757-29543768 Phaseolus vulgaris
Phvul.001G115500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29536757-29538756 Phaseolus vulgaris
Phvul.001G115500 2.0kb downstream 2.0kb downstream 7012 true Chr01: 29538757-29545768 Phaseolus vulgaris
Phvul.001G115500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29543769-29545768 Phaseolus vulgaris
Phvul.001G115500 5.0kb upstream 5.0kb upstream 10012 true Chr01: 29533757-29543768 Phaseolus vulgaris
Phvul.001G115500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29533757-29538756 Phaseolus vulgaris
Phvul.001G115500 5.0kb downstream 5.0kb downstream 10012 true Chr01: 29538757-29548768 Phaseolus vulgaris
Phvul.001G115500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29543769-29548768 Phaseolus vulgaris
Phvul.001G115500 10.0kb upstream 10.0kb upstream 15012 true Chr01: 29528757-29543768 Phaseolus vulgaris
Phvul.001G115500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29528757-29538756 Phaseolus vulgaris
Phvul.001G115500 10.0kb downstream 10.0kb downstream 15012 true Chr01: 29538757-29553768 Phaseolus vulgaris
Phvul.001G115500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29543769-29553768 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304309 5265 Fabidae View MSA
124062319 5270 Rosid View MSA
123746028 5271 Pentapetalae View MSA
122795784 5272 Eudicot View MSA
122046084 5273 Angiosperm View MSA
121348772 5274 Embryophyte View MSA
123381008 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8177 0.0 38.9142    
cufflinks 16.7994 0.0 43.9366   High
cufflinks 13.5894 0.0 35.9374    
cufflinks 9.92246 0.0 27.0383   Low
cufflinks 11.4956 0.0 30.8937   Low
cufflinks 15.7884 0.0 41.4244    
cufflinks 16.2562 0.0 42.5817    
cufflinks 16.629 0.0 43.4385   High
cufflinks 12.6568 0.0 33.7505    
cufflinks 14.6881 0.0 38.6906    
cufflinks 11.929 0.0 31.9505    

0 Strain