Gene : Phvul.001G117100 P. vulgaris v2.1
Defline:  (1 of 4) K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) Genomic Order:  1106
Name:  ? Phvul.001G117100 Secondary Identifier:  ? PAC:37168307
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G117100 0.5kb upstream 0.5kb upstream 3710 true Chr01: 29922688-29926397 Phaseolus vulgaris
Phvul.001G117100 0.5kb upstream 0.5kb upstream 500 false Chr01: 29925898-29926397 Phaseolus vulgaris
Phvul.001G117100 0.5kb downstream 0.5kb downstream 3710 true Chr01: 29922188-29925897 Phaseolus vulgaris
Phvul.001G117100 0.5kb downstream 0.5kb downstream 500 false Chr01: 29922188-29922687 Phaseolus vulgaris
Phvul.001G117100 1.0kb upstream 1.0kb upstream 4210 true Chr01: 29922688-29926897 Phaseolus vulgaris
Phvul.001G117100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29925898-29926897 Phaseolus vulgaris
Phvul.001G117100 1.0kb downstream 1.0kb downstream 4210 true Chr01: 29921688-29925897 Phaseolus vulgaris
Phvul.001G117100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29921688-29922687 Phaseolus vulgaris
Phvul.001G117100 2.0kb upstream 2.0kb upstream 5210 true Chr01: 29922688-29927897 Phaseolus vulgaris
Phvul.001G117100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29925898-29927897 Phaseolus vulgaris
Phvul.001G117100 2.0kb downstream 2.0kb downstream 5210 true Chr01: 29920688-29925897 Phaseolus vulgaris
Phvul.001G117100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29920688-29922687 Phaseolus vulgaris
Phvul.001G117100 5.0kb upstream 5.0kb upstream 8210 true Chr01: 29922688-29930897 Phaseolus vulgaris
Phvul.001G117100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29925898-29930897 Phaseolus vulgaris
Phvul.001G117100 5.0kb downstream 5.0kb downstream 8210 true Chr01: 29917688-29925897 Phaseolus vulgaris
Phvul.001G117100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29917688-29922687 Phaseolus vulgaris
Phvul.001G117100 10.0kb upstream 10.0kb upstream 13210 true Chr01: 29922688-29935897 Phaseolus vulgaris
Phvul.001G117100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29925898-29935897 Phaseolus vulgaris
Phvul.001G117100 10.0kb downstream 10.0kb downstream 13210 true Chr01: 29912688-29925897 Phaseolus vulgaris
Phvul.001G117100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29912688-29922687 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255382 5265 Fabidae View MSA
124073209 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6882 0.0 81.4048    
cufflinks 28.7457 0.0 80.0156   High
cufflinks 15.3766 0.0 44.5544    
cufflinks 34.7206 0.0 96.7311 High High
cufflinks 19.5592 0.0 62.7416    
cufflinks 12.7755 0.0 38.2241   Low
cufflinks 17.4258 0.0 50.3658    
cufflinks 17.593 0.0 56.5001    
cufflinks 24.1299 0.0 67.4304    
cufflinks 11.9881 0.0 36.453   Low
cufflinks 23.2215 0.0 74.1024    

0 Strain