Gene : Phvul.001G119500 P. vulgaris v2.1
Defline:  (1 of 287) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  1128
Name:  ? Phvul.001G119500 Secondary Identifier:  ? PAC:37170769
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G119500 0.5kb upstream 0.5kb upstream 1436 true Chr01: 30757442-30758877 Phaseolus vulgaris
Phvul.001G119500 0.5kb upstream 0.5kb upstream 500 false Chr01: 30758378-30758877 Phaseolus vulgaris
Phvul.001G119500 0.5kb downstream 0.5kb downstream 1436 true Chr01: 30756942-30758377 Phaseolus vulgaris
Phvul.001G119500 0.5kb downstream 0.5kb downstream 500 false Chr01: 30756942-30757441 Phaseolus vulgaris
Phvul.001G119500 1.0kb upstream 1.0kb upstream 1936 true Chr01: 30757442-30759377 Phaseolus vulgaris
Phvul.001G119500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30758378-30759377 Phaseolus vulgaris
Phvul.001G119500 1.0kb downstream 1.0kb downstream 1936 true Chr01: 30756442-30758377 Phaseolus vulgaris
Phvul.001G119500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30756442-30757441 Phaseolus vulgaris
Phvul.001G119500 2.0kb upstream 2.0kb upstream 2936 true Chr01: 30757442-30760377 Phaseolus vulgaris
Phvul.001G119500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30758378-30760377 Phaseolus vulgaris
Phvul.001G119500 2.0kb downstream 2.0kb downstream 2936 true Chr01: 30755442-30758377 Phaseolus vulgaris
Phvul.001G119500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30755442-30757441 Phaseolus vulgaris
Phvul.001G119500 5.0kb upstream 5.0kb upstream 5936 true Chr01: 30757442-30763377 Phaseolus vulgaris
Phvul.001G119500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30758378-30763377 Phaseolus vulgaris
Phvul.001G119500 5.0kb downstream 5.0kb downstream 5936 true Chr01: 30752442-30758377 Phaseolus vulgaris
Phvul.001G119500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30752442-30757441 Phaseolus vulgaris
Phvul.001G119500 10.0kb upstream 10.0kb upstream 10936 true Chr01: 30757442-30768377 Phaseolus vulgaris
Phvul.001G119500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30758378-30768377 Phaseolus vulgaris
Phvul.001G119500 10.0kb downstream 10.0kb downstream 10936 true Chr01: 30747442-30758377 Phaseolus vulgaris
Phvul.001G119500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30747442-30757441 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303336 5265 Fabidae View MSA
124067582 5270 Rosid View MSA
123746852 5271 Pentapetalae View MSA
122794085 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1923 0.0 41.4444   Low
cufflinks 26.9187 0.0 70.8244    
cufflinks 39.9114 0.0 103.479 High High
cufflinks 33.3448 0.0 86.309    
cufflinks 30.0269 0.0 77.9273    
cufflinks 33.2051 0.0 86.5148 High  
cufflinks 16.2379 0.0 43.8584    
cufflinks 11.3942 0.0 32.1371   Low
cufflinks 24.1529 0.0 63.4283    
cufflinks 15.1155 0.0 41.4462   Low
cufflinks 30.2597 0.0 78.647    

0 Strain