Gene : Phvul.001G118900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11654//PTHR11654:SF92 - OLIGOPEPTIDE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1122
Name:  ? Phvul.001G118900 Secondary Identifier:  ? PAC:37169967
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G118900 0.5kb upstream 0.5kb upstream 5181 true Chr01: 30550670-30555850 Phaseolus vulgaris
Phvul.001G118900 0.5kb upstream 0.5kb upstream 500 false Chr01: 30555351-30555850 Phaseolus vulgaris
Phvul.001G118900 0.5kb downstream 0.5kb downstream 5181 true Chr01: 30550170-30555350 Phaseolus vulgaris
Phvul.001G118900 0.5kb downstream 0.5kb downstream 500 false Chr01: 30550170-30550669 Phaseolus vulgaris
Phvul.001G118900 1.0kb upstream 1.0kb upstream 5681 true Chr01: 30550670-30556350 Phaseolus vulgaris
Phvul.001G118900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30555351-30556350 Phaseolus vulgaris
Phvul.001G118900 1.0kb downstream 1.0kb downstream 5681 true Chr01: 30549670-30555350 Phaseolus vulgaris
Phvul.001G118900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30549670-30550669 Phaseolus vulgaris
Phvul.001G118900 2.0kb upstream 2.0kb upstream 6681 true Chr01: 30550670-30557350 Phaseolus vulgaris
Phvul.001G118900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30555351-30557350 Phaseolus vulgaris
Phvul.001G118900 2.0kb downstream 2.0kb downstream 6681 true Chr01: 30548670-30555350 Phaseolus vulgaris
Phvul.001G118900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30548670-30550669 Phaseolus vulgaris
Phvul.001G118900 5.0kb upstream 5.0kb upstream 9681 true Chr01: 30550670-30560350 Phaseolus vulgaris
Phvul.001G118900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30555351-30560350 Phaseolus vulgaris
Phvul.001G118900 5.0kb downstream 5.0kb downstream 9681 true Chr01: 30545670-30555350 Phaseolus vulgaris
Phvul.001G118900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30545670-30550669 Phaseolus vulgaris
Phvul.001G118900 10.0kb upstream 10.0kb upstream 14681 true Chr01: 30550670-30565350 Phaseolus vulgaris
Phvul.001G118900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30555351-30565350 Phaseolus vulgaris
Phvul.001G118900 10.0kb downstream 10.0kb downstream 14681 true Chr01: 30540670-30555350 Phaseolus vulgaris
Phvul.001G118900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30540670-30550669 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314269 5265 Fabidae View MSA
124070259 5270 Rosid View MSA
123749052 5271 Pentapetalae View MSA
122793607 5272 Eudicot View MSA
122044547 5273 Angiosperm View MSA
121351267 5274 Embryophyte View MSA
123382085 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2295 0.0 60.4599    
cufflinks 1.14085 0.0 5.90839    
cufflinks 69.3905 0.0 284.668 High  
cufflinks 3.62729 0.0 13.3039    
cufflinks 8.28505 0.0 30.2403    
cufflinks 49.153 0.0 187.979 High  
cufflinks 30.0416 0.0 109.388 High  
cufflinks 76.6542 0.0 323.124 High  
cufflinks 33.3582 0.0 122.928 High  
cufflinks 0.0378528 0.0 0.183963 Low Low
cufflinks 13.832 0.0 52.4197    

0 Strain