Gene : Phvul.001G121800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1186
Name:  ? Phvul.001G121800 Secondary Identifier:  ? PAC:37168259
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G121800 0.5kb upstream 0.5kb upstream 8188 true Chr01: 33716848-33725035 Phaseolus vulgaris
Phvul.001G121800 0.5kb upstream 0.5kb upstream 500 false Chr01: 33724536-33725035 Phaseolus vulgaris
Phvul.001G121800 0.5kb downstream 0.5kb downstream 8188 true Chr01: 33716348-33724535 Phaseolus vulgaris
Phvul.001G121800 0.5kb downstream 0.5kb downstream 500 false Chr01: 33716348-33716847 Phaseolus vulgaris
Phvul.001G121800 1.0kb upstream 1.0kb upstream 8688 true Chr01: 33716848-33725535 Phaseolus vulgaris
Phvul.001G121800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33724536-33725535 Phaseolus vulgaris
Phvul.001G121800 1.0kb downstream 1.0kb downstream 8688 true Chr01: 33715848-33724535 Phaseolus vulgaris
Phvul.001G121800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33715848-33716847 Phaseolus vulgaris
Phvul.001G121800 2.0kb upstream 2.0kb upstream 9688 true Chr01: 33716848-33726535 Phaseolus vulgaris
Phvul.001G121800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33724536-33726535 Phaseolus vulgaris
Phvul.001G121800 2.0kb downstream 2.0kb downstream 9688 true Chr01: 33714848-33724535 Phaseolus vulgaris
Phvul.001G121800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33714848-33716847 Phaseolus vulgaris
Phvul.001G121800 5.0kb upstream 5.0kb upstream 12688 true Chr01: 33716848-33729535 Phaseolus vulgaris
Phvul.001G121800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33724536-33729535 Phaseolus vulgaris
Phvul.001G121800 5.0kb downstream 5.0kb downstream 12688 true Chr01: 33711848-33724535 Phaseolus vulgaris
Phvul.001G121800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33711848-33716847 Phaseolus vulgaris
Phvul.001G121800 10.0kb upstream 10.0kb upstream 17688 true Chr01: 33716848-33734535 Phaseolus vulgaris
Phvul.001G121800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33724536-33734535 Phaseolus vulgaris
Phvul.001G121800 10.0kb downstream 10.0kb downstream 17688 true Chr01: 33706848-33724535 Phaseolus vulgaris
Phvul.001G121800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33706848-33716847 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305067 5265 Fabidae View MSA
124061848 5270 Rosid View MSA
123737894 5271 Pentapetalae View MSA
122788479 5272 Eudicot View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.8116 0.0 45.537   High
cufflinks 12.922 0.0 35.8152    
cufflinks 12.1452 0.0 33.758    
cufflinks 15.4174 0.0 42.0696   High
cufflinks 13.6623 0.0 37.7858    
cufflinks 10.2315 0.0 29.0017   Low
cufflinks 11.2951 0.0 31.7381    
cufflinks 15.4751 0.0 42.1614   High
cufflinks 11.3894 0.0 31.9984    
cufflinks 9.42279 0.0 26.886   Low
cufflinks 14.1814 0.0 39.1038    

0 Strain