Gene : Phvul.001G241300 P. vulgaris v2.1
Defline:  (1 of 2) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Genomic Order:  2393
Name:  ? Phvul.001G241300 Secondary Identifier:  ? PAC:37169593
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G241300 0.5kb upstream 0.5kb upstream 2617 true Chr01: 49393545-49396161 Phaseolus vulgaris
Phvul.001G241300 0.5kb upstream 0.5kb upstream 500 false Chr01: 49395662-49396161 Phaseolus vulgaris
Phvul.001G241300 0.5kb downstream 0.5kb downstream 2617 true Chr01: 49393045-49395661 Phaseolus vulgaris
Phvul.001G241300 0.5kb downstream 0.5kb downstream 500 false Chr01: 49393045-49393544 Phaseolus vulgaris
Phvul.001G241300 1.0kb upstream 1.0kb upstream 3117 true Chr01: 49393545-49396661 Phaseolus vulgaris
Phvul.001G241300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49395662-49396661 Phaseolus vulgaris
Phvul.001G241300 1.0kb downstream 1.0kb downstream 3117 true Chr01: 49392545-49395661 Phaseolus vulgaris
Phvul.001G241300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49392545-49393544 Phaseolus vulgaris
Phvul.001G241300 2.0kb upstream 2.0kb upstream 4117 true Chr01: 49393545-49397661 Phaseolus vulgaris
Phvul.001G241300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49395662-49397661 Phaseolus vulgaris
Phvul.001G241300 2.0kb downstream 2.0kb downstream 4117 true Chr01: 49391545-49395661 Phaseolus vulgaris
Phvul.001G241300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49391545-49393544 Phaseolus vulgaris
Phvul.001G241300 5.0kb upstream 5.0kb upstream 7117 true Chr01: 49393545-49400661 Phaseolus vulgaris
Phvul.001G241300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49395662-49400661 Phaseolus vulgaris
Phvul.001G241300 5.0kb downstream 5.0kb downstream 7117 true Chr01: 49388545-49395661 Phaseolus vulgaris
Phvul.001G241300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49388545-49393544 Phaseolus vulgaris
Phvul.001G241300 10.0kb upstream 10.0kb upstream 12117 true Chr01: 49393545-49405661 Phaseolus vulgaris
Phvul.001G241300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49395662-49405661 Phaseolus vulgaris
Phvul.001G241300 10.0kb downstream 10.0kb downstream 12117 true Chr01: 49383545-49395661 Phaseolus vulgaris
Phvul.001G241300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49383545-49393544 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306387 5265 Fabidae View MSA
124067891 5270 Rosid View MSA
123747109 5271 Pentapetalae View MSA
122789570 5272 Eudicot View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.6828 0.0 107.89 High High
cufflinks 18.8595 0.0 48.7492    
cufflinks 6.06261 0.0 16.7233   Low
cufflinks 10.2095 0.0 26.8272    
cufflinks 14.4909 0.0 37.589    
cufflinks 5.90359 0.0 16.2227   Low
cufflinks 37.9453 0.0 100.848 High High
cufflinks 17.9715 0.0 46.4615    
cufflinks 11.3487 0.0 29.6022    
cufflinks 58.2739 0.0 159.422 High High
cufflinks 14.0565 0.0 36.4518    

0 Strain