Gene : Phvul.001G245800 P. vulgaris v2.1
Defline:  (1 of 4) PTHR31301:SF4 - LOB DOMAIN-CONTAINING PROTEIN 12 Genomic Order:  2438
Name:  ? Phvul.001G245800 Secondary Identifier:  ? PAC:37169311
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G245800 0.5kb upstream 0.5kb upstream 1409 true Chr01: 49771545-49772953 Phaseolus vulgaris
Phvul.001G245800 0.5kb upstream 0.5kb upstream 500 false Chr01: 49771545-49772044 Phaseolus vulgaris
Phvul.001G245800 0.5kb downstream 0.5kb downstream 1409 true Chr01: 49772045-49773453 Phaseolus vulgaris
Phvul.001G245800 0.5kb downstream 0.5kb downstream 500 false Chr01: 49772954-49773453 Phaseolus vulgaris
Phvul.001G245800 1.0kb upstream 1.0kb upstream 1909 true Chr01: 49771045-49772953 Phaseolus vulgaris
Phvul.001G245800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49771045-49772044 Phaseolus vulgaris
Phvul.001G245800 1.0kb downstream 1.0kb downstream 1909 true Chr01: 49772045-49773953 Phaseolus vulgaris
Phvul.001G245800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49772954-49773953 Phaseolus vulgaris
Phvul.001G245800 2.0kb upstream 2.0kb upstream 2909 true Chr01: 49770045-49772953 Phaseolus vulgaris
Phvul.001G245800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49770045-49772044 Phaseolus vulgaris
Phvul.001G245800 2.0kb downstream 2.0kb downstream 2909 true Chr01: 49772045-49774953 Phaseolus vulgaris
Phvul.001G245800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49772954-49774953 Phaseolus vulgaris
Phvul.001G245800 5.0kb upstream 5.0kb upstream 5909 true Chr01: 49767045-49772953 Phaseolus vulgaris
Phvul.001G245800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49767045-49772044 Phaseolus vulgaris
Phvul.001G245800 5.0kb downstream 5.0kb downstream 5909 true Chr01: 49772045-49777953 Phaseolus vulgaris
Phvul.001G245800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49772954-49777953 Phaseolus vulgaris
Phvul.001G245800 10.0kb upstream 10.0kb upstream 10909 true Chr01: 49762045-49772953 Phaseolus vulgaris
Phvul.001G245800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49762045-49772044 Phaseolus vulgaris
Phvul.001G245800 10.0kb downstream 10.0kb downstream 10909 true Chr01: 49772045-49782953 Phaseolus vulgaris
Phvul.001G245800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49772954-49782953 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307046 5265 Fabidae View MSA
124071000 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.41002 0.0 11.7856   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.92358 0.0 7.02159    
cufflinks 0.114929 0.0 0.539655 Low Low
cufflinks 0.0849125 0.0 0.409407 Low Low
cufflinks 0.817344 0.0 3.20338    
cufflinks 1.876 0.0 6.87246    
cufflinks 1.76409 0.0 6.49765    
cufflinks 0.718416 0.0 2.85223    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain