Gene : Phvul.001G231000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  2291
Name:  ? Phvul.001G231000 Secondary Identifier:  ? PAC:37170940
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G231000 0.5kb upstream 0.5kb upstream 2904 true Chr01: 48512384-48515287 Phaseolus vulgaris
Phvul.001G231000 0.5kb upstream 0.5kb upstream 500 false Chr01: 48514788-48515287 Phaseolus vulgaris
Phvul.001G231000 0.5kb downstream 0.5kb downstream 2904 true Chr01: 48511884-48514787 Phaseolus vulgaris
Phvul.001G231000 0.5kb downstream 0.5kb downstream 500 false Chr01: 48511884-48512383 Phaseolus vulgaris
Phvul.001G231000 1.0kb upstream 1.0kb upstream 3404 true Chr01: 48512384-48515787 Phaseolus vulgaris
Phvul.001G231000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48514788-48515787 Phaseolus vulgaris
Phvul.001G231000 1.0kb downstream 1.0kb downstream 3404 true Chr01: 48511384-48514787 Phaseolus vulgaris
Phvul.001G231000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48511384-48512383 Phaseolus vulgaris
Phvul.001G231000 2.0kb upstream 2.0kb upstream 4404 true Chr01: 48512384-48516787 Phaseolus vulgaris
Phvul.001G231000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48514788-48516787 Phaseolus vulgaris
Phvul.001G231000 2.0kb downstream 2.0kb downstream 4404 true Chr01: 48510384-48514787 Phaseolus vulgaris
Phvul.001G231000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48510384-48512383 Phaseolus vulgaris
Phvul.001G231000 5.0kb upstream 5.0kb upstream 7404 true Chr01: 48512384-48519787 Phaseolus vulgaris
Phvul.001G231000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48514788-48519787 Phaseolus vulgaris
Phvul.001G231000 5.0kb downstream 5.0kb downstream 7404 true Chr01: 48507384-48514787 Phaseolus vulgaris
Phvul.001G231000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48507384-48512383 Phaseolus vulgaris
Phvul.001G231000 10.0kb upstream 10.0kb upstream 12404 true Chr01: 48512384-48524787 Phaseolus vulgaris
Phvul.001G231000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48514788-48524787 Phaseolus vulgaris
Phvul.001G231000 10.0kb downstream 10.0kb downstream 12404 true Chr01: 48502384-48514787 Phaseolus vulgaris
Phvul.001G231000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48502384-48512383 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306413 5265 Fabidae View MSA
124061812 5270 Rosid View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.5998 0.0 130.57 High  
cufflinks 32.6104 0.0 91.0444    
cufflinks 50.6108 0.0 140.82 High  
cufflinks 125.151 0.0 403.186 High High
cufflinks 47.9945 0.0 134.543 High  
cufflinks 54.0073 0.0 151.65 High  
cufflinks 15.2092 0.0 45.0049    
cufflinks 6.79594 0.0 21.7863   Low
cufflinks 17.8383 0.0 52.0951    
cufflinks 21.5693 0.0 61.5002    
cufflinks 63.1488 0.0 181.657 High  

0 Strain