Gene : Phvul.001G235600 P. vulgaris v2.1
Defline:  (1 of 3) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  2336
Name:  ? Phvul.001G235600 Secondary Identifier:  ? PAC:37170196
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G235600 0.5kb upstream 0.5kb upstream 3686 true Chr01: 48900381-48904066 Phaseolus vulgaris
Phvul.001G235600 0.5kb upstream 0.5kb upstream 500 false Chr01: 48903567-48904066 Phaseolus vulgaris
Phvul.001G235600 0.5kb downstream 0.5kb downstream 3686 true Chr01: 48899881-48903566 Phaseolus vulgaris
Phvul.001G235600 0.5kb downstream 0.5kb downstream 500 false Chr01: 48899881-48900380 Phaseolus vulgaris
Phvul.001G235600 1.0kb upstream 1.0kb upstream 4186 true Chr01: 48900381-48904566 Phaseolus vulgaris
Phvul.001G235600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48903567-48904566 Phaseolus vulgaris
Phvul.001G235600 1.0kb downstream 1.0kb downstream 4186 true Chr01: 48899381-48903566 Phaseolus vulgaris
Phvul.001G235600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48899381-48900380 Phaseolus vulgaris
Phvul.001G235600 2.0kb upstream 2.0kb upstream 5186 true Chr01: 48900381-48905566 Phaseolus vulgaris
Phvul.001G235600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48903567-48905566 Phaseolus vulgaris
Phvul.001G235600 2.0kb downstream 2.0kb downstream 5186 true Chr01: 48898381-48903566 Phaseolus vulgaris
Phvul.001G235600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48898381-48900380 Phaseolus vulgaris
Phvul.001G235600 5.0kb upstream 5.0kb upstream 8186 true Chr01: 48900381-48908566 Phaseolus vulgaris
Phvul.001G235600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48903567-48908566 Phaseolus vulgaris
Phvul.001G235600 5.0kb downstream 5.0kb downstream 8186 true Chr01: 48895381-48903566 Phaseolus vulgaris
Phvul.001G235600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48895381-48900380 Phaseolus vulgaris
Phvul.001G235600 10.0kb upstream 10.0kb upstream 13186 true Chr01: 48900381-48913566 Phaseolus vulgaris
Phvul.001G235600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48903567-48913566 Phaseolus vulgaris
Phvul.001G235600 10.0kb downstream 10.0kb downstream 13186 true Chr01: 48890381-48903566 Phaseolus vulgaris
Phvul.001G235600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48890381-48900380 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305033 5265 Fabidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5443 0.0 45.049    
cufflinks 37.3966 0.0 97.025 High  
cufflinks 100.041 0.0 264.488 High High
cufflinks 23.5925 0.0 62.4647    
cufflinks 14.9438 0.0 41.3299    
cufflinks 53.2079 0.0 137.558 High High
cufflinks 1.2949 0.0 4.64262   Low
cufflinks 2.67476 0.0 8.86931   Low
cufflinks 1.90778 0.0 6.56799   Low
cufflinks 8.06201 0.0 23.619    
cufflinks 12.5366 0.0 35.2202    

0 Strain