Gene : Phvul.001G236900 P. vulgaris v2.1
Defline:  (1 of 2) 1.2.1.41//2.7.2.11//PROLINE-MULTI - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase // Glutamate 5-kinase / Gamma-glutamyl kinase Genomic Order:  2349
Name:  ? Phvul.001G236900 Secondary Identifier:  ? PAC:37168265
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGININE-SYN4-PWY Phaseolus vulgaris pathologic  
Pvulgaris CITRULBIO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PROSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3341 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6922 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G236900 0.5kb upstream 0.5kb upstream 6741 true Chr01: 49000921-49007661 Phaseolus vulgaris
Phvul.001G236900 0.5kb upstream 0.5kb upstream 500 false Chr01: 49007162-49007661 Phaseolus vulgaris
Phvul.001G236900 0.5kb downstream 0.5kb downstream 6741 true Chr01: 49000421-49007161 Phaseolus vulgaris
Phvul.001G236900 0.5kb downstream 0.5kb downstream 500 false Chr01: 49000421-49000920 Phaseolus vulgaris
Phvul.001G236900 1.0kb upstream 1.0kb upstream 7241 true Chr01: 49000921-49008161 Phaseolus vulgaris
Phvul.001G236900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49007162-49008161 Phaseolus vulgaris
Phvul.001G236900 1.0kb downstream 1.0kb downstream 7241 true Chr01: 48999921-49007161 Phaseolus vulgaris
Phvul.001G236900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48999921-49000920 Phaseolus vulgaris
Phvul.001G236900 2.0kb upstream 2.0kb upstream 8241 true Chr01: 49000921-49009161 Phaseolus vulgaris
Phvul.001G236900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49007162-49009161 Phaseolus vulgaris
Phvul.001G236900 2.0kb downstream 2.0kb downstream 8241 true Chr01: 48998921-49007161 Phaseolus vulgaris
Phvul.001G236900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48998921-49000920 Phaseolus vulgaris
Phvul.001G236900 5.0kb upstream 5.0kb upstream 11241 true Chr01: 49000921-49012161 Phaseolus vulgaris
Phvul.001G236900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49007162-49012161 Phaseolus vulgaris
Phvul.001G236900 5.0kb downstream 5.0kb downstream 11241 true Chr01: 48995921-49007161 Phaseolus vulgaris
Phvul.001G236900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48995921-49000920 Phaseolus vulgaris
Phvul.001G236900 10.0kb upstream 10.0kb upstream 16241 true Chr01: 49000921-49017161 Phaseolus vulgaris
Phvul.001G236900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49007162-49017161 Phaseolus vulgaris
Phvul.001G236900 10.0kb downstream 10.0kb downstream 16241 true Chr01: 48990921-49007161 Phaseolus vulgaris
Phvul.001G236900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48990921-49000920 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311815 5265 Fabidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.98741 0.0 11.2022    
cufflinks 6.14891 0.0 16.6366    
cufflinks 3.62205 0.0 10.2433    
cufflinks 10.7213 0.0 28.1136   High
cufflinks 2.16185 0.0 6.55444   Low
cufflinks 11.0785 0.0 28.8488   High
cufflinks 6.30772 0.0 17.0432    
cufflinks 11.0847 0.0 28.8375   High
cufflinks 11.7812 0.0 30.6585   High
cufflinks 3.0575 0.0 8.83962   Low
cufflinks 3.42272 0.0 9.82668    

0 Strain