Gene : Phvul.001G226900 P. vulgaris v2.1
Defline:  (1 of 65) PF13947 - Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  2251
Name:  ? Phvul.001G226900 Secondary Identifier:  ? PAC:37168928
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G226900 0.5kb upstream 0.5kb upstream 1148 true Chr01: 48138076-48139223 Phaseolus vulgaris
Phvul.001G226900 0.5kb upstream 0.5kb upstream 500 false Chr01: 48138724-48139223 Phaseolus vulgaris
Phvul.001G226900 0.5kb downstream 0.5kb downstream 1148 true Chr01: 48137576-48138723 Phaseolus vulgaris
Phvul.001G226900 0.5kb downstream 0.5kb downstream 500 false Chr01: 48137576-48138075 Phaseolus vulgaris
Phvul.001G226900 1.0kb upstream 1.0kb upstream 1648 true Chr01: 48138076-48139723 Phaseolus vulgaris
Phvul.001G226900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48138724-48139723 Phaseolus vulgaris
Phvul.001G226900 1.0kb downstream 1.0kb downstream 1648 true Chr01: 48137076-48138723 Phaseolus vulgaris
Phvul.001G226900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48137076-48138075 Phaseolus vulgaris
Phvul.001G226900 2.0kb upstream 2.0kb upstream 2648 true Chr01: 48138076-48140723 Phaseolus vulgaris
Phvul.001G226900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48138724-48140723 Phaseolus vulgaris
Phvul.001G226900 2.0kb downstream 2.0kb downstream 2648 true Chr01: 48136076-48138723 Phaseolus vulgaris
Phvul.001G226900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48136076-48138075 Phaseolus vulgaris
Phvul.001G226900 5.0kb upstream 5.0kb upstream 5648 true Chr01: 48138076-48143723 Phaseolus vulgaris
Phvul.001G226900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48138724-48143723 Phaseolus vulgaris
Phvul.001G226900 5.0kb downstream 5.0kb downstream 5648 true Chr01: 48133076-48138723 Phaseolus vulgaris
Phvul.001G226900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48133076-48138075 Phaseolus vulgaris
Phvul.001G226900 10.0kb upstream 10.0kb upstream 10648 true Chr01: 48138076-48148723 Phaseolus vulgaris
Phvul.001G226900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48138724-48148723 Phaseolus vulgaris
Phvul.001G226900 10.0kb downstream 10.0kb downstream 10648 true Chr01: 48128076-48138723 Phaseolus vulgaris
Phvul.001G226900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48128076-48138075 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306223 5265 Fabidae View MSA
124070699 5270 Rosid View MSA
123749932 5271 Pentapetalae View MSA
122794455 5272 Eudicot View MSA
122051146 5273 Angiosperm View MSA
121312314 5274 Embryophyte View MSA
123349498 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.56543 0.0 6.09398    
cufflinks 0.34978 0.0 1.53158 Low  
cufflinks 8.01415 0.0 26.9626   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain