Gene : Phvul.001G225700 P. vulgaris v2.1
Defline:  (1 of 14) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  2239
Name:  ? Phvul.001G225700 Secondary Identifier:  ? PAC:37169950
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G225700 0.5kb upstream 0.5kb upstream 2311 true Chr01: 48031533-48033843 Phaseolus vulgaris
Phvul.001G225700 0.5kb upstream 0.5kb upstream 500 false Chr01: 48033344-48033843 Phaseolus vulgaris
Phvul.001G225700 0.5kb downstream 0.5kb downstream 2311 true Chr01: 48031033-48033343 Phaseolus vulgaris
Phvul.001G225700 0.5kb downstream 0.5kb downstream 500 false Chr01: 48031033-48031532 Phaseolus vulgaris
Phvul.001G225700 1.0kb upstream 1.0kb upstream 2811 true Chr01: 48031533-48034343 Phaseolus vulgaris
Phvul.001G225700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48033344-48034343 Phaseolus vulgaris
Phvul.001G225700 1.0kb downstream 1.0kb downstream 2811 true Chr01: 48030533-48033343 Phaseolus vulgaris
Phvul.001G225700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48030533-48031532 Phaseolus vulgaris
Phvul.001G225700 2.0kb upstream 2.0kb upstream 3811 true Chr01: 48031533-48035343 Phaseolus vulgaris
Phvul.001G225700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48033344-48035343 Phaseolus vulgaris
Phvul.001G225700 2.0kb downstream 2.0kb downstream 3811 true Chr01: 48029533-48033343 Phaseolus vulgaris
Phvul.001G225700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48029533-48031532 Phaseolus vulgaris
Phvul.001G225700 5.0kb upstream 5.0kb upstream 6811 true Chr01: 48031533-48038343 Phaseolus vulgaris
Phvul.001G225700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48033344-48038343 Phaseolus vulgaris
Phvul.001G225700 5.0kb downstream 5.0kb downstream 6811 true Chr01: 48026533-48033343 Phaseolus vulgaris
Phvul.001G225700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48026533-48031532 Phaseolus vulgaris
Phvul.001G225700 10.0kb upstream 10.0kb upstream 11811 true Chr01: 48031533-48043343 Phaseolus vulgaris
Phvul.001G225700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48033344-48043343 Phaseolus vulgaris
Phvul.001G225700 10.0kb downstream 10.0kb downstream 11811 true Chr01: 48021533-48033343 Phaseolus vulgaris
Phvul.001G225700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48021533-48031532 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254584 5265 Fabidae View MSA
124062410 5270 Rosid View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.19601 0.0 9.47009    
cufflinks 8.57518 0.0 23.1122    
cufflinks 2.00666 0.0 6.29836    
cufflinks 10.6195 0.0 28.2305   High
cufflinks 13.0328 0.0 34.1568   High
cufflinks 3.23846 0.0 9.56948    
cufflinks 1.53386 0.0 4.89254   Low
cufflinks 0.803798 0.0 2.77644   Low
cufflinks 4.20743 0.0 12.0171    
cufflinks 4.30022 0.0 12.3496    
cufflinks 12.3558 0.0 32.4168   High

0 Strain