Gene : Phvul.001G227400 P. vulgaris v2.1
Genomic Order:  2256 Name:  ? Phvul.001G227400
Secondary Identifier:  ? PAC:37170541
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G227400 0.5kb upstream 0.5kb upstream 2278 true Chr01: 48175084-48177361 Phaseolus vulgaris
Phvul.001G227400 0.5kb upstream 0.5kb upstream 500 false Chr01: 48175084-48175583 Phaseolus vulgaris
Phvul.001G227400 0.5kb downstream 0.5kb downstream 2278 true Chr01: 48175584-48177861 Phaseolus vulgaris
Phvul.001G227400 0.5kb downstream 0.5kb downstream 500 false Chr01: 48177362-48177861 Phaseolus vulgaris
Phvul.001G227400 1.0kb upstream 1.0kb upstream 2778 true Chr01: 48174584-48177361 Phaseolus vulgaris
Phvul.001G227400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48174584-48175583 Phaseolus vulgaris
Phvul.001G227400 1.0kb downstream 1.0kb downstream 2778 true Chr01: 48175584-48178361 Phaseolus vulgaris
Phvul.001G227400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48177362-48178361 Phaseolus vulgaris
Phvul.001G227400 2.0kb upstream 2.0kb upstream 3778 true Chr01: 48173584-48177361 Phaseolus vulgaris
Phvul.001G227400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48173584-48175583 Phaseolus vulgaris
Phvul.001G227400 2.0kb downstream 2.0kb downstream 3778 true Chr01: 48175584-48179361 Phaseolus vulgaris
Phvul.001G227400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48177362-48179361 Phaseolus vulgaris
Phvul.001G227400 5.0kb upstream 5.0kb upstream 6778 true Chr01: 48170584-48177361 Phaseolus vulgaris
Phvul.001G227400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48170584-48175583 Phaseolus vulgaris
Phvul.001G227400 5.0kb downstream 5.0kb downstream 6778 true Chr01: 48175584-48182361 Phaseolus vulgaris
Phvul.001G227400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48177362-48182361 Phaseolus vulgaris
Phvul.001G227400 10.0kb upstream 10.0kb upstream 11778 true Chr01: 48165584-48177361 Phaseolus vulgaris
Phvul.001G227400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48165584-48175583 Phaseolus vulgaris
Phvul.001G227400 10.0kb downstream 10.0kb downstream 11778 true Chr01: 48175584-48187361 Phaseolus vulgaris
Phvul.001G227400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48177362-48187361 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297437 5265 Fabidae View MSA
124069891 5270 Rosid View MSA
123747205 5271 Pentapetalae View MSA
122796968 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.06987 0.0 15.9391    
cufflinks 2.44437 0.0 8.31605    
cufflinks 1.11658 0.0 4.09492   Low
cufflinks 0.966466 0.0 3.616   Low
cufflinks 11.641 0.0 33.5155   High
cufflinks 2.5069 0.0 8.50232    
cufflinks 5.73256 0.0 17.6698    
cufflinks 4.23957 0.0 13.4668    
cufflinks 2.98486 0.0 9.92172    
cufflinks 12.2679 0.0 34.9458   High
cufflinks 9.56532 0.0 28.0487   High

0 Strain