Gene : Phvul.001G229100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR28620:SF1 - PROTEIN F25B4.8, ISOFORM A Genomic Order:  2272
Name:  ? Phvul.001G229100 Secondary Identifier:  ? PAC:37169053
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G229100 0.5kb upstream 0.5kb upstream 2222 true Chr01: 48306718-48308939 Phaseolus vulgaris
Phvul.001G229100 0.5kb upstream 0.5kb upstream 500 false Chr01: 48308440-48308939 Phaseolus vulgaris
Phvul.001G229100 0.5kb downstream 0.5kb downstream 2222 true Chr01: 48306218-48308439 Phaseolus vulgaris
Phvul.001G229100 0.5kb downstream 0.5kb downstream 500 false Chr01: 48306218-48306717 Phaseolus vulgaris
Phvul.001G229100 1.0kb upstream 1.0kb upstream 2722 true Chr01: 48306718-48309439 Phaseolus vulgaris
Phvul.001G229100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48308440-48309439 Phaseolus vulgaris
Phvul.001G229100 1.0kb downstream 1.0kb downstream 2722 true Chr01: 48305718-48308439 Phaseolus vulgaris
Phvul.001G229100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48305718-48306717 Phaseolus vulgaris
Phvul.001G229100 2.0kb upstream 2.0kb upstream 3722 true Chr01: 48306718-48310439 Phaseolus vulgaris
Phvul.001G229100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48308440-48310439 Phaseolus vulgaris
Phvul.001G229100 2.0kb downstream 2.0kb downstream 3722 true Chr01: 48304718-48308439 Phaseolus vulgaris
Phvul.001G229100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48304718-48306717 Phaseolus vulgaris
Phvul.001G229100 5.0kb upstream 5.0kb upstream 6722 true Chr01: 48306718-48313439 Phaseolus vulgaris
Phvul.001G229100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48308440-48313439 Phaseolus vulgaris
Phvul.001G229100 5.0kb downstream 5.0kb downstream 6722 true Chr01: 48301718-48308439 Phaseolus vulgaris
Phvul.001G229100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48301718-48306717 Phaseolus vulgaris
Phvul.001G229100 10.0kb upstream 10.0kb upstream 11722 true Chr01: 48306718-48318439 Phaseolus vulgaris
Phvul.001G229100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48308440-48318439 Phaseolus vulgaris
Phvul.001G229100 10.0kb downstream 10.0kb downstream 11722 true Chr01: 48296718-48308439 Phaseolus vulgaris
Phvul.001G229100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48296718-48306717 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314715 5265 Fabidae View MSA
124068266 5270 Rosid View MSA
123738048 5271 Pentapetalae View MSA
122791227 5272 Eudicot View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7016 0.0 32.4447   High
cufflinks 4.03998 0.0 12.5661    
cufflinks 2.86613 0.0 9.20711    
cufflinks 9.88979 0.0 28.0834   High
cufflinks 2.74909 0.0 8.99754    
cufflinks 1.69622 0.0 5.81059   Low
cufflinks 6.20506 0.0 18.3974    
cufflinks 10.6426 0.0 29.684   High
cufflinks 4.93461 0.0 15.1049    
cufflinks 6.83318 0.0 20.0567    
cufflinks 2.71603 0.0 8.9044    

0 Strain