Gene : Phvul.001G222200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11601//PTHR11601:SF47 - CYSTEINE DESULFURYLASE // SUBFAMILY NOT NAMED Genomic Order:  2204
Name:  ? Phvul.001G222200 Secondary Identifier:  ? PAC:37170650
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G222200 0.5kb upstream 0.5kb upstream 3318 true Chr01: 47756608-47759925 Phaseolus vulgaris
Phvul.001G222200 0.5kb upstream 0.5kb upstream 500 false Chr01: 47756608-47757107 Phaseolus vulgaris
Phvul.001G222200 0.5kb downstream 0.5kb downstream 3318 true Chr01: 47757108-47760425 Phaseolus vulgaris
Phvul.001G222200 0.5kb downstream 0.5kb downstream 500 false Chr01: 47759926-47760425 Phaseolus vulgaris
Phvul.001G222200 1.0kb upstream 1.0kb upstream 3818 true Chr01: 47756108-47759925 Phaseolus vulgaris
Phvul.001G222200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47756108-47757107 Phaseolus vulgaris
Phvul.001G222200 1.0kb downstream 1.0kb downstream 3818 true Chr01: 47757108-47760925 Phaseolus vulgaris
Phvul.001G222200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47759926-47760925 Phaseolus vulgaris
Phvul.001G222200 2.0kb upstream 2.0kb upstream 4818 true Chr01: 47755108-47759925 Phaseolus vulgaris
Phvul.001G222200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47755108-47757107 Phaseolus vulgaris
Phvul.001G222200 2.0kb downstream 2.0kb downstream 4818 true Chr01: 47757108-47761925 Phaseolus vulgaris
Phvul.001G222200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47759926-47761925 Phaseolus vulgaris
Phvul.001G222200 5.0kb upstream 5.0kb upstream 7818 true Chr01: 47752108-47759925 Phaseolus vulgaris
Phvul.001G222200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47752108-47757107 Phaseolus vulgaris
Phvul.001G222200 5.0kb downstream 5.0kb downstream 7818 true Chr01: 47757108-47764925 Phaseolus vulgaris
Phvul.001G222200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47759926-47764925 Phaseolus vulgaris
Phvul.001G222200 10.0kb upstream 10.0kb upstream 12818 true Chr01: 47747108-47759925 Phaseolus vulgaris
Phvul.001G222200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47747108-47757107 Phaseolus vulgaris
Phvul.001G222200 10.0kb downstream 10.0kb downstream 12818 true Chr01: 47757108-47769925 Phaseolus vulgaris
Phvul.001G222200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47759926-47769925 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300086 5265 Fabidae View MSA
124063514 5270 Rosid View MSA
123741535 5271 Pentapetalae View MSA
122792322 5272 Eudicot View MSA
122047079 5273 Angiosperm View MSA
121347897 5274 Embryophyte View MSA
123426680 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 98.9994 0.0 284.055 High High
cufflinks 42.8124 0.0 113.06 High  
cufflinks 15.1739 0.0 39.4803   Low
cufflinks 36.0205 0.0 94.2189 High  
cufflinks 36.0359 0.0 94.2977 High  
cufflinks 19.2457 0.0 49.7825   Low
cufflinks 27.7262 0.0 71.9291 High  
cufflinks 24.5583 0.0 63.5251    
cufflinks 31.2895 0.0 81.3735 High  
cufflinks 41.2177 0.0 108.63 High  
cufflinks 40.3968 0.0 106.455 High  

0 Strain