Gene : Phvul.001G216200 P. vulgaris v2.1
Defline:  (1 of 3) 1.1.1.145 - 3-beta-hydroxy-Delta(5)-steroid dehydrogenase / Progesterone reductase Genomic Order:  2145
Name:  ? Phvul.001G216200 Secondary Identifier:  ? PAC:37170081
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G216200 0.5kb upstream 0.5kb upstream 1876 true Chr01: 47247434-47249309 Phaseolus vulgaris
Phvul.001G216200 0.5kb upstream 0.5kb upstream 500 false Chr01: 47247434-47247933 Phaseolus vulgaris
Phvul.001G216200 0.5kb downstream 0.5kb downstream 1876 true Chr01: 47247934-47249809 Phaseolus vulgaris
Phvul.001G216200 0.5kb downstream 0.5kb downstream 500 false Chr01: 47249310-47249809 Phaseolus vulgaris
Phvul.001G216200 1.0kb upstream 1.0kb upstream 2376 true Chr01: 47246934-47249309 Phaseolus vulgaris
Phvul.001G216200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 47246934-47247933 Phaseolus vulgaris
Phvul.001G216200 1.0kb downstream 1.0kb downstream 2376 true Chr01: 47247934-47250309 Phaseolus vulgaris
Phvul.001G216200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 47249310-47250309 Phaseolus vulgaris
Phvul.001G216200 2.0kb upstream 2.0kb upstream 3376 true Chr01: 47245934-47249309 Phaseolus vulgaris
Phvul.001G216200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 47245934-47247933 Phaseolus vulgaris
Phvul.001G216200 2.0kb downstream 2.0kb downstream 3376 true Chr01: 47247934-47251309 Phaseolus vulgaris
Phvul.001G216200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 47249310-47251309 Phaseolus vulgaris
Phvul.001G216200 5.0kb upstream 5.0kb upstream 6376 true Chr01: 47242934-47249309 Phaseolus vulgaris
Phvul.001G216200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 47242934-47247933 Phaseolus vulgaris
Phvul.001G216200 5.0kb downstream 5.0kb downstream 6376 true Chr01: 47247934-47254309 Phaseolus vulgaris
Phvul.001G216200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 47249310-47254309 Phaseolus vulgaris
Phvul.001G216200 10.0kb upstream 10.0kb upstream 11376 true Chr01: 47237934-47249309 Phaseolus vulgaris
Phvul.001G216200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 47237934-47247933 Phaseolus vulgaris
Phvul.001G216200 10.0kb downstream 10.0kb downstream 11376 true Chr01: 47247934-47259309 Phaseolus vulgaris
Phvul.001G216200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 47249310-47259309 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303462 5265 Fabidae View MSA
124066555 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.453921 0.0 1.75115   Low
cufflinks 0.345099 0.0 1.35355 Low Low
cufflinks 0.881304 0.0 3.19835    
cufflinks 1.68185 0.0 5.74473    
cufflinks 2.79403 0.0 9.02722    
cufflinks 2.5503 0.0 8.26421    
cufflinks 18.8368 0.0 49.8523   High
cufflinks 21.7326 0.0 56.9801   High
cufflinks 18.3968 0.0 48.7622   High
cufflinks 0.558376 0.0 2.11237   Low
cufflinks 5.31407 0.0 15.8971    

0 Strain