Gene : Phvul.001G201600 P. vulgaris v2.1
Defline:  (1 of 3) K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Genomic Order:  1998
Name:  ? Phvul.001G201600 Secondary Identifier:  ? PAC:37167697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G201600 0.5kb upstream 0.5kb upstream 5802 true Chr01: 46030342-46036143 Phaseolus vulgaris
Phvul.001G201600 0.5kb upstream 0.5kb upstream 500 false Chr01: 46035644-46036143 Phaseolus vulgaris
Phvul.001G201600 0.5kb downstream 0.5kb downstream 5802 true Chr01: 46029842-46035643 Phaseolus vulgaris
Phvul.001G201600 0.5kb downstream 0.5kb downstream 500 false Chr01: 46029842-46030341 Phaseolus vulgaris
Phvul.001G201600 1.0kb upstream 1.0kb upstream 6302 true Chr01: 46030342-46036643 Phaseolus vulgaris
Phvul.001G201600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46035644-46036643 Phaseolus vulgaris
Phvul.001G201600 1.0kb downstream 1.0kb downstream 6302 true Chr01: 46029342-46035643 Phaseolus vulgaris
Phvul.001G201600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46029342-46030341 Phaseolus vulgaris
Phvul.001G201600 2.0kb upstream 2.0kb upstream 7302 true Chr01: 46030342-46037643 Phaseolus vulgaris
Phvul.001G201600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46035644-46037643 Phaseolus vulgaris
Phvul.001G201600 2.0kb downstream 2.0kb downstream 7302 true Chr01: 46028342-46035643 Phaseolus vulgaris
Phvul.001G201600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46028342-46030341 Phaseolus vulgaris
Phvul.001G201600 5.0kb upstream 5.0kb upstream 10302 true Chr01: 46030342-46040643 Phaseolus vulgaris
Phvul.001G201600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46035644-46040643 Phaseolus vulgaris
Phvul.001G201600 5.0kb downstream 5.0kb downstream 10302 true Chr01: 46025342-46035643 Phaseolus vulgaris
Phvul.001G201600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46025342-46030341 Phaseolus vulgaris
Phvul.001G201600 10.0kb upstream 10.0kb upstream 15302 true Chr01: 46030342-46045643 Phaseolus vulgaris
Phvul.001G201600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46035644-46045643 Phaseolus vulgaris
Phvul.001G201600 10.0kb downstream 10.0kb downstream 15302 true Chr01: 46020342-46035643 Phaseolus vulgaris
Phvul.001G201600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46020342-46030341 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300167 5265 Fabidae View MSA
124062995 5270 Rosid View MSA
123747202 5271 Pentapetalae View MSA
122791871 5272 Eudicot View MSA
122044702 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349683 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.45996 0.0 33.7433    
cufflinks 16.0364 0.0 52.7155    
cufflinks 22.4977 0.0 71.6588   High
cufflinks 8.74476 0.0 31.9596    
cufflinks 11.0286 0.0 38.3946    
cufflinks 19.8292 0.0 63.6198    
cufflinks 14.468 0.0 47.704    
cufflinks 14.7473 0.0 48.7527    
cufflinks 15.2947 0.0 50.8599    
cufflinks 3.01725 0.0 12.712   Low
cufflinks 14.0508 0.0 48.031    

0 Strain