Gene : Phvul.001G193400 P. vulgaris v2.1
Defline:  (1 of 31) PF08659 - KR domain (KR) Genomic Order:  1913
Name:  ? Phvul.001G193400 Secondary Identifier:  ? PAC:37169365
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G193400 0.5kb upstream 0.5kb upstream 2618 true Chr01: 45213517-45216134 Phaseolus vulgaris
Phvul.001G193400 0.5kb upstream 0.5kb upstream 500 false Chr01: 45213517-45214016 Phaseolus vulgaris
Phvul.001G193400 0.5kb downstream 0.5kb downstream 2618 true Chr01: 45214017-45216634 Phaseolus vulgaris
Phvul.001G193400 0.5kb downstream 0.5kb downstream 500 false Chr01: 45216135-45216634 Phaseolus vulgaris
Phvul.001G193400 1.0kb upstream 1.0kb upstream 3118 true Chr01: 45213017-45216134 Phaseolus vulgaris
Phvul.001G193400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45213017-45214016 Phaseolus vulgaris
Phvul.001G193400 1.0kb downstream 1.0kb downstream 3118 true Chr01: 45214017-45217134 Phaseolus vulgaris
Phvul.001G193400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45216135-45217134 Phaseolus vulgaris
Phvul.001G193400 2.0kb upstream 2.0kb upstream 4118 true Chr01: 45212017-45216134 Phaseolus vulgaris
Phvul.001G193400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45212017-45214016 Phaseolus vulgaris
Phvul.001G193400 2.0kb downstream 2.0kb downstream 4118 true Chr01: 45214017-45218134 Phaseolus vulgaris
Phvul.001G193400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45216135-45218134 Phaseolus vulgaris
Phvul.001G193400 5.0kb upstream 5.0kb upstream 7118 true Chr01: 45209017-45216134 Phaseolus vulgaris
Phvul.001G193400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45209017-45214016 Phaseolus vulgaris
Phvul.001G193400 5.0kb downstream 5.0kb downstream 7118 true Chr01: 45214017-45221134 Phaseolus vulgaris
Phvul.001G193400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45216135-45221134 Phaseolus vulgaris
Phvul.001G193400 10.0kb upstream 10.0kb upstream 12118 true Chr01: 45204017-45216134 Phaseolus vulgaris
Phvul.001G193400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45204017-45214016 Phaseolus vulgaris
Phvul.001G193400 10.0kb downstream 10.0kb downstream 12118 true Chr01: 45214017-45226134 Phaseolus vulgaris
Phvul.001G193400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45216135-45226134 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299359 5265 Fabidae View MSA
124070564 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0669029 0.0 0.312484 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.185319 0.0 0.781572 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.9611 0.0 46.0414    
cufflinks 3.5156 0.0 11.2991    
cufflinks 38.3837 0.0 99.4047 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain