Gene : Phvul.001G199600 P. vulgaris v2.1
Defline:  (1 of 2) 3.4.17.11 - Glutamate carboxypeptidase / Carboxypeptidase G2 Genomic Order:  1978
Name:  ? Phvul.001G199600 Secondary Identifier:  ? PAC:37168917
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G199600 0.5kb upstream 0.5kb upstream 5198 true Chr01: 45846849-45852046 Phaseolus vulgaris
Phvul.001G199600 0.5kb upstream 0.5kb upstream 500 false Chr01: 45846849-45847348 Phaseolus vulgaris
Phvul.001G199600 0.5kb downstream 0.5kb downstream 5198 true Chr01: 45847349-45852546 Phaseolus vulgaris
Phvul.001G199600 0.5kb downstream 0.5kb downstream 500 false Chr01: 45852047-45852546 Phaseolus vulgaris
Phvul.001G199600 1.0kb upstream 1.0kb upstream 5698 true Chr01: 45846349-45852046 Phaseolus vulgaris
Phvul.001G199600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45846349-45847348 Phaseolus vulgaris
Phvul.001G199600 1.0kb downstream 1.0kb downstream 5698 true Chr01: 45847349-45853046 Phaseolus vulgaris
Phvul.001G199600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45852047-45853046 Phaseolus vulgaris
Phvul.001G199600 2.0kb upstream 2.0kb upstream 6698 true Chr01: 45845349-45852046 Phaseolus vulgaris
Phvul.001G199600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45845349-45847348 Phaseolus vulgaris
Phvul.001G199600 2.0kb downstream 2.0kb downstream 6698 true Chr01: 45847349-45854046 Phaseolus vulgaris
Phvul.001G199600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45852047-45854046 Phaseolus vulgaris
Phvul.001G199600 5.0kb upstream 5.0kb upstream 9698 true Chr01: 45842349-45852046 Phaseolus vulgaris
Phvul.001G199600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45842349-45847348 Phaseolus vulgaris
Phvul.001G199600 5.0kb downstream 5.0kb downstream 9698 true Chr01: 45847349-45857046 Phaseolus vulgaris
Phvul.001G199600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45852047-45857046 Phaseolus vulgaris
Phvul.001G199600 10.0kb upstream 10.0kb upstream 14698 true Chr01: 45837349-45852046 Phaseolus vulgaris
Phvul.001G199600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45837349-45847348 Phaseolus vulgaris
Phvul.001G199600 10.0kb downstream 10.0kb downstream 14698 true Chr01: 45847349-45862046 Phaseolus vulgaris
Phvul.001G199600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45852047-45862046 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306721 5265 Fabidae View MSA
124066108 5270 Rosid View MSA
123738632 5271 Pentapetalae View MSA
122791153 5272 Eudicot View MSA
122047569 5273 Angiosperm View MSA
121345590 5274 Embryophyte View MSA
123380240 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01454 0.0 3.30024   Low
cufflinks 2.59274 0.0 7.58664    
cufflinks 14.2599 0.0 36.9147    
cufflinks 0.764196 0.0 2.57471   Low
cufflinks 31.3255 0.0 82.6546   High
cufflinks 1.16809 0.0 3.74463   Low
cufflinks 11.5035 0.0 29.8338    
cufflinks 11.4649 0.0 29.7867    
cufflinks 15.6631 0.0 40.4861    
cufflinks 40.8815 0.0 110.114 High High
cufflinks 13.9688 0.0 36.1258    

0 Strain