Gene : Phvul.001G198900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23024:SF102 - CARBOXYLESTERASE 15-RELATED Genomic Order:  1970
Name:  ? Phvul.001G198900 Secondary Identifier:  ? PAC:37168767
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6303 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G198900 0.5kb upstream 0.5kb upstream 3021 true Chr01: 45801545-45804565 Phaseolus vulgaris
Phvul.001G198900 0.5kb upstream 0.5kb upstream 500 false Chr01: 45804066-45804565 Phaseolus vulgaris
Phvul.001G198900 0.5kb downstream 0.5kb downstream 3021 true Chr01: 45801045-45804065 Phaseolus vulgaris
Phvul.001G198900 0.5kb downstream 0.5kb downstream 500 false Chr01: 45801045-45801544 Phaseolus vulgaris
Phvul.001G198900 1.0kb upstream 1.0kb upstream 3521 true Chr01: 45801545-45805065 Phaseolus vulgaris
Phvul.001G198900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45804066-45805065 Phaseolus vulgaris
Phvul.001G198900 1.0kb downstream 1.0kb downstream 3521 true Chr01: 45800545-45804065 Phaseolus vulgaris
Phvul.001G198900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45800545-45801544 Phaseolus vulgaris
Phvul.001G198900 2.0kb upstream 2.0kb upstream 4521 true Chr01: 45801545-45806065 Phaseolus vulgaris
Phvul.001G198900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45804066-45806065 Phaseolus vulgaris
Phvul.001G198900 2.0kb downstream 2.0kb downstream 4521 true Chr01: 45799545-45804065 Phaseolus vulgaris
Phvul.001G198900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45799545-45801544 Phaseolus vulgaris
Phvul.001G198900 5.0kb upstream 5.0kb upstream 7521 true Chr01: 45801545-45809065 Phaseolus vulgaris
Phvul.001G198900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45804066-45809065 Phaseolus vulgaris
Phvul.001G198900 5.0kb downstream 5.0kb downstream 7521 true Chr01: 45796545-45804065 Phaseolus vulgaris
Phvul.001G198900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45796545-45801544 Phaseolus vulgaris
Phvul.001G198900 10.0kb upstream 10.0kb upstream 12521 true Chr01: 45801545-45814065 Phaseolus vulgaris
Phvul.001G198900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45804066-45814065 Phaseolus vulgaris
Phvul.001G198900 10.0kb downstream 10.0kb downstream 12521 true Chr01: 45791545-45804065 Phaseolus vulgaris
Phvul.001G198900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45791545-45801544 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305068 5265 Fabidae View MSA
124067556 5270 Rosid View MSA
123751656 5271 Pentapetalae View MSA
122793188 5272 Eudicot View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.11298 0.0 9.63802    
cufflinks 0.191885 0.0 0.77452 Low Low
cufflinks 0.871964 0.0 3.11958    
cufflinks 0.42692 0.0 1.62124 Low  
cufflinks 2.08283 0.0 6.7294    
cufflinks 0.824649 0.0 2.95379    
cufflinks 11.7251 0.0 31.5196   High
cufflinks 5.38142 0.0 15.6171    
cufflinks 16.8766 0.0 44.3162   High
cufflinks 0.448067 0.0 1.6914    
cufflinks 1.33339 0.0 4.52201    

0 Strain