Gene : Phvul.001G185600 P. vulgaris v2.1
Defline:  (1 of 15) PF11961 - Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  1834
Name:  ? Phvul.001G185600 Secondary Identifier:  ? PAC:37168460
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G185600 0.5kb upstream 0.5kb upstream 2927 true Chr01: 44347653-44350579 Phaseolus vulgaris
Phvul.001G185600 0.5kb upstream 0.5kb upstream 500 false Chr01: 44350080-44350579 Phaseolus vulgaris
Phvul.001G185600 0.5kb downstream 0.5kb downstream 2927 true Chr01: 44347153-44350079 Phaseolus vulgaris
Phvul.001G185600 0.5kb downstream 0.5kb downstream 500 false Chr01: 44347153-44347652 Phaseolus vulgaris
Phvul.001G185600 1.0kb upstream 1.0kb upstream 3427 true Chr01: 44347653-44351079 Phaseolus vulgaris
Phvul.001G185600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44350080-44351079 Phaseolus vulgaris
Phvul.001G185600 1.0kb downstream 1.0kb downstream 3427 true Chr01: 44346653-44350079 Phaseolus vulgaris
Phvul.001G185600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44346653-44347652 Phaseolus vulgaris
Phvul.001G185600 2.0kb upstream 2.0kb upstream 4427 true Chr01: 44347653-44352079 Phaseolus vulgaris
Phvul.001G185600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44350080-44352079 Phaseolus vulgaris
Phvul.001G185600 2.0kb downstream 2.0kb downstream 4427 true Chr01: 44345653-44350079 Phaseolus vulgaris
Phvul.001G185600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44345653-44347652 Phaseolus vulgaris
Phvul.001G185600 5.0kb upstream 5.0kb upstream 7427 true Chr01: 44347653-44355079 Phaseolus vulgaris
Phvul.001G185600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44350080-44355079 Phaseolus vulgaris
Phvul.001G185600 5.0kb downstream 5.0kb downstream 7427 true Chr01: 44342653-44350079 Phaseolus vulgaris
Phvul.001G185600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44342653-44347652 Phaseolus vulgaris
Phvul.001G185600 10.0kb upstream 10.0kb upstream 12427 true Chr01: 44347653-44360079 Phaseolus vulgaris
Phvul.001G185600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44350080-44360079 Phaseolus vulgaris
Phvul.001G185600 10.0kb downstream 10.0kb downstream 12427 true Chr01: 44337653-44350079 Phaseolus vulgaris
Phvul.001G185600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44337653-44347652 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304941 5265 Fabidae View MSA
124070488 5270 Rosid View MSA
123744675 5271 Pentapetalae View MSA
122797750 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02081 0.0 8.948    
cufflinks 1.80687 0.0 8.11299    
cufflinks 1.11129 0.0 4.30347   Low
cufflinks 1.50346 0.0 7.19546    
cufflinks 1.51361 0.0 7.20314    
cufflinks 1.93853 0.0 8.49966    
cufflinks 3.11065 0.0 12.2321   High
cufflinks 1.51618 0.0 7.18865    
cufflinks 2.29508 0.0 9.74052    
cufflinks 1.05966 0.0 5.84238   Low
cufflinks 1.84526 0.0 8.29612    

0 Strain