Gene : Phvul.001G186500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Genomic Order:  1843
Name:  ? Phvul.001G186500 Secondary Identifier:  ? PAC:37168174
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G186500 0.5kb upstream 0.5kb upstream 11025 true Chr01: 44449098-44460122 Phaseolus vulgaris
Phvul.001G186500 0.5kb upstream 0.5kb upstream 500 false Chr01: 44449098-44449597 Phaseolus vulgaris
Phvul.001G186500 0.5kb downstream 0.5kb downstream 11025 true Chr01: 44449598-44460622 Phaseolus vulgaris
Phvul.001G186500 0.5kb downstream 0.5kb downstream 500 false Chr01: 44460123-44460622 Phaseolus vulgaris
Phvul.001G186500 1.0kb upstream 1.0kb upstream 11525 true Chr01: 44448598-44460122 Phaseolus vulgaris
Phvul.001G186500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44448598-44449597 Phaseolus vulgaris
Phvul.001G186500 1.0kb downstream 1.0kb downstream 11525 true Chr01: 44449598-44461122 Phaseolus vulgaris
Phvul.001G186500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44460123-44461122 Phaseolus vulgaris
Phvul.001G186500 2.0kb upstream 2.0kb upstream 12525 true Chr01: 44447598-44460122 Phaseolus vulgaris
Phvul.001G186500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44447598-44449597 Phaseolus vulgaris
Phvul.001G186500 2.0kb downstream 2.0kb downstream 12525 true Chr01: 44449598-44462122 Phaseolus vulgaris
Phvul.001G186500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44460123-44462122 Phaseolus vulgaris
Phvul.001G186500 5.0kb upstream 5.0kb upstream 15525 true Chr01: 44444598-44460122 Phaseolus vulgaris
Phvul.001G186500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44444598-44449597 Phaseolus vulgaris
Phvul.001G186500 5.0kb downstream 5.0kb downstream 15525 true Chr01: 44449598-44465122 Phaseolus vulgaris
Phvul.001G186500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44460123-44465122 Phaseolus vulgaris
Phvul.001G186500 10.0kb upstream 10.0kb upstream 20525 true Chr01: 44439598-44460122 Phaseolus vulgaris
Phvul.001G186500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44439598-44449597 Phaseolus vulgaris
Phvul.001G186500 10.0kb downstream 10.0kb downstream 20525 true Chr01: 44449598-44470122 Phaseolus vulgaris
Phvul.001G186500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44460123-44470122 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312789 5265 Fabidae View MSA
124065197 5270 Rosid View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.48475 0.0 6.79266   Low
cufflinks 4.54662 0.0 11.8983    
cufflinks 4.567 0.0 11.9343    
cufflinks 3.78431 0.0 10.0363    
cufflinks 6.25297 0.0 16.2181   High
cufflinks 3.96747 0.0 10.4513    
cufflinks 4.11638 0.0 10.7968    
cufflinks 4.06204 0.0 10.6467    
cufflinks 3.56567 0.0 9.42876    
cufflinks 1.36708 0.0 3.9652   Low
cufflinks 5.2629 0.0 13.7148    

0 Strain