Gene : Phvul.001G189600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10072//PTHR10072:SF51 - IRON-SULFUR CLUSTER ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1875
Name:  ? Phvul.001G189600 Secondary Identifier:  ? PAC:37169714
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G189600 0.5kb upstream 0.5kb upstream 4759 true Chr01: 44882577-44887335 Phaseolus vulgaris
Phvul.001G189600 0.5kb upstream 0.5kb upstream 500 false Chr01: 44886836-44887335 Phaseolus vulgaris
Phvul.001G189600 0.5kb downstream 0.5kb downstream 4759 true Chr01: 44882077-44886835 Phaseolus vulgaris
Phvul.001G189600 0.5kb downstream 0.5kb downstream 500 false Chr01: 44882077-44882576 Phaseolus vulgaris
Phvul.001G189600 1.0kb upstream 1.0kb upstream 5259 true Chr01: 44882577-44887835 Phaseolus vulgaris
Phvul.001G189600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44886836-44887835 Phaseolus vulgaris
Phvul.001G189600 1.0kb downstream 1.0kb downstream 5259 true Chr01: 44881577-44886835 Phaseolus vulgaris
Phvul.001G189600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44881577-44882576 Phaseolus vulgaris
Phvul.001G189600 2.0kb upstream 2.0kb upstream 6259 true Chr01: 44882577-44888835 Phaseolus vulgaris
Phvul.001G189600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44886836-44888835 Phaseolus vulgaris
Phvul.001G189600 2.0kb downstream 2.0kb downstream 6259 true Chr01: 44880577-44886835 Phaseolus vulgaris
Phvul.001G189600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44880577-44882576 Phaseolus vulgaris
Phvul.001G189600 5.0kb upstream 5.0kb upstream 9259 true Chr01: 44882577-44891835 Phaseolus vulgaris
Phvul.001G189600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44886836-44891835 Phaseolus vulgaris
Phvul.001G189600 5.0kb downstream 5.0kb downstream 9259 true Chr01: 44877577-44886835 Phaseolus vulgaris
Phvul.001G189600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44877577-44882576 Phaseolus vulgaris
Phvul.001G189600 10.0kb upstream 10.0kb upstream 14259 true Chr01: 44882577-44896835 Phaseolus vulgaris
Phvul.001G189600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44886836-44896835 Phaseolus vulgaris
Phvul.001G189600 10.0kb downstream 10.0kb downstream 14259 true Chr01: 44872577-44886835 Phaseolus vulgaris
Phvul.001G189600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44872577-44882576 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303340 5265 Fabidae View MSA
124063872 5270 Rosid View MSA
123749019 5271 Pentapetalae View MSA
122797014 5272 Eudicot View MSA
122045205 5273 Angiosperm View MSA
121345103 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4886 0.0 55.0389   High
cufflinks 6.04685 0.0 24.4486    
cufflinks 9.54193 0.0 34.8918    
cufflinks 13.2059 0.0 47.0563   High
cufflinks 6.68885 0.0 27.0064    
cufflinks 5.95268 0.0 24.9235    
cufflinks 5.39631 0.0 22.443    
cufflinks 5.06822 0.0 21.3867    
cufflinks 6.81267 0.0 26.7303    
cufflinks 5.08375 0.0 21.497    
cufflinks 7.94161 0.0 30.3463    

0 Strain