Gene : Phvul.002G040800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11851:SF152 - PROTEIN UCR-2.3 Genomic Order:  408
Name:  ? Phvul.002G040800 Secondary Identifier:  ? PAC:37176362
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G040800 0.5kb upstream 0.5kb upstream 15537 true Chr02: 3873001-3888537 Phaseolus vulgaris
Phvul.002G040800 0.5kb upstream 0.5kb upstream 500 false Chr02: 3873001-3873500 Phaseolus vulgaris
Phvul.002G040800 0.5kb downstream 0.5kb downstream 15537 true Chr02: 3873501-3889037 Phaseolus vulgaris
Phvul.002G040800 0.5kb downstream 0.5kb downstream 500 false Chr02: 3888538-3889037 Phaseolus vulgaris
Phvul.002G040800 1.0kb upstream 1.0kb upstream 16037 true Chr02: 3872501-3888537 Phaseolus vulgaris
Phvul.002G040800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3872501-3873500 Phaseolus vulgaris
Phvul.002G040800 1.0kb downstream 1.0kb downstream 16037 true Chr02: 3873501-3889537 Phaseolus vulgaris
Phvul.002G040800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3888538-3889537 Phaseolus vulgaris
Phvul.002G040800 2.0kb upstream 2.0kb upstream 17037 true Chr02: 3871501-3888537 Phaseolus vulgaris
Phvul.002G040800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3871501-3873500 Phaseolus vulgaris
Phvul.002G040800 2.0kb downstream 2.0kb downstream 17037 true Chr02: 3873501-3890537 Phaseolus vulgaris
Phvul.002G040800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3888538-3890537 Phaseolus vulgaris
Phvul.002G040800 5.0kb upstream 5.0kb upstream 20037 true Chr02: 3868501-3888537 Phaseolus vulgaris
Phvul.002G040800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3868501-3873500 Phaseolus vulgaris
Phvul.002G040800 5.0kb downstream 5.0kb downstream 20037 true Chr02: 3873501-3893537 Phaseolus vulgaris
Phvul.002G040800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3888538-3893537 Phaseolus vulgaris
Phvul.002G040800 10.0kb upstream 10.0kb upstream 25037 true Chr02: 3863501-3888537 Phaseolus vulgaris
Phvul.002G040800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3863501-3873500 Phaseolus vulgaris
Phvul.002G040800 10.0kb downstream 10.0kb downstream 25037 true Chr02: 3873501-3898537 Phaseolus vulgaris
Phvul.002G040800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3888538-3898537 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307576 5265 Fabidae View MSA
124063909 5270 Rosid View MSA
123737862 5271 Pentapetalae View MSA
122791409 5272 Eudicot View MSA
122044944 5273 Angiosperm View MSA
121346655 5274 Embryophyte View MSA
123428815 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9786 0.0 61.2988    
cufflinks 16.4463 0.0 42.9665    
cufflinks 107.691 0.0 352.99 High High
cufflinks 13.361 0.0 34.6001    
cufflinks 15.3009 0.0 39.7808    
cufflinks 33.8703 0.0 93.6058 High  
cufflinks 16.3695 0.0 42.7629    
cufflinks 17.5282 0.0 46.0176    
cufflinks 13.6283 0.0 35.3459    
cufflinks 41.881 0.0 118.288 High  
cufflinks 11.5033 0.0 29.7422    

0 Strain