Gene : Phvul.002G043600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23257//PTHR23257:SF429 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  437
Name:  ? Phvul.002G043600 Secondary Identifier:  ? PAC:37177456
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G043600 0.5kb upstream 0.5kb upstream 4719 true Chr02: 4086162-4090880 Phaseolus vulgaris
Phvul.002G043600 0.5kb upstream 0.5kb upstream 500 false Chr02: 4090381-4090880 Phaseolus vulgaris
Phvul.002G043600 0.5kb downstream 0.5kb downstream 4719 true Chr02: 4085662-4090380 Phaseolus vulgaris
Phvul.002G043600 0.5kb downstream 0.5kb downstream 500 false Chr02: 4085662-4086161 Phaseolus vulgaris
Phvul.002G043600 1.0kb upstream 1.0kb upstream 5219 true Chr02: 4086162-4091380 Phaseolus vulgaris
Phvul.002G043600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4090381-4091380 Phaseolus vulgaris
Phvul.002G043600 1.0kb downstream 1.0kb downstream 5219 true Chr02: 4085162-4090380 Phaseolus vulgaris
Phvul.002G043600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4085162-4086161 Phaseolus vulgaris
Phvul.002G043600 2.0kb upstream 2.0kb upstream 6219 true Chr02: 4086162-4092380 Phaseolus vulgaris
Phvul.002G043600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4090381-4092380 Phaseolus vulgaris
Phvul.002G043600 2.0kb downstream 2.0kb downstream 6219 true Chr02: 4084162-4090380 Phaseolus vulgaris
Phvul.002G043600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4084162-4086161 Phaseolus vulgaris
Phvul.002G043600 5.0kb upstream 5.0kb upstream 9219 true Chr02: 4086162-4095380 Phaseolus vulgaris
Phvul.002G043600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4090381-4095380 Phaseolus vulgaris
Phvul.002G043600 5.0kb downstream 5.0kb downstream 9219 true Chr02: 4081162-4090380 Phaseolus vulgaris
Phvul.002G043600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4081162-4086161 Phaseolus vulgaris
Phvul.002G043600 10.0kb upstream 10.0kb upstream 14219 true Chr02: 4086162-4100380 Phaseolus vulgaris
Phvul.002G043600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4090381-4100380 Phaseolus vulgaris
Phvul.002G043600 10.0kb downstream 10.0kb downstream 14219 true Chr02: 4076162-4090380 Phaseolus vulgaris
Phvul.002G043600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4076162-4086161 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300141 5265 Fabidae View MSA
124074070 5270 Rosid View MSA
123747183 5271 Pentapetalae View MSA
122786660 5272 Eudicot View MSA
122042010 5273 Angiosperm View MSA
121348422 5274 Embryophyte View MSA
123380860 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0083 0.0 56.3752   High
cufflinks 7.32623 0.0 23.8439    
cufflinks 13.1976 0.0 44.3027    
cufflinks 12.4413 0.0 44.787    
cufflinks 7.93223 0.0 26.3418    
cufflinks 8.38171 0.0 30.7497    
cufflinks 7.72811 0.0 24.8846    
cufflinks 3.87875 0.0 14.44   Low
cufflinks 9.67319 0.0 34.4613    
cufflinks 7.34208 0.0 23.7474    
cufflinks 9.75562 0.0 34.9092    

0 Strain