Gene : Phvul.002G030700 P. vulgaris v2.1
Defline:  (1 of 1) K14544 - U3 small nucleolar RNA-associated protein 22 (UTP22, NOL6) Genomic Order:  305
Name:  ? Phvul.002G030700 Secondary Identifier:  ? PAC:37174554
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G030700 0.5kb upstream 0.5kb upstream 9766 true Chr02: 3111726-3121491 Phaseolus vulgaris
Phvul.002G030700 0.5kb upstream 0.5kb upstream 500 false Chr02: 3120992-3121491 Phaseolus vulgaris
Phvul.002G030700 0.5kb downstream 0.5kb downstream 9766 true Chr02: 3111226-3120991 Phaseolus vulgaris
Phvul.002G030700 0.5kb downstream 0.5kb downstream 500 false Chr02: 3111226-3111725 Phaseolus vulgaris
Phvul.002G030700 1.0kb upstream 1.0kb upstream 10266 true Chr02: 3111726-3121991 Phaseolus vulgaris
Phvul.002G030700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3120992-3121991 Phaseolus vulgaris
Phvul.002G030700 1.0kb downstream 1.0kb downstream 10266 true Chr02: 3110726-3120991 Phaseolus vulgaris
Phvul.002G030700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3110726-3111725 Phaseolus vulgaris
Phvul.002G030700 2.0kb upstream 2.0kb upstream 11266 true Chr02: 3111726-3122991 Phaseolus vulgaris
Phvul.002G030700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3120992-3122991 Phaseolus vulgaris
Phvul.002G030700 2.0kb downstream 2.0kb downstream 11266 true Chr02: 3109726-3120991 Phaseolus vulgaris
Phvul.002G030700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3109726-3111725 Phaseolus vulgaris
Phvul.002G030700 5.0kb upstream 5.0kb upstream 14266 true Chr02: 3111726-3125991 Phaseolus vulgaris
Phvul.002G030700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3120992-3125991 Phaseolus vulgaris
Phvul.002G030700 5.0kb downstream 5.0kb downstream 14266 true Chr02: 3106726-3120991 Phaseolus vulgaris
Phvul.002G030700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3106726-3111725 Phaseolus vulgaris
Phvul.002G030700 10.0kb upstream 10.0kb upstream 19266 true Chr02: 3111726-3130991 Phaseolus vulgaris
Phvul.002G030700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3120992-3130991 Phaseolus vulgaris
Phvul.002G030700 10.0kb downstream 10.0kb downstream 19266 true Chr02: 3101726-3120991 Phaseolus vulgaris
Phvul.002G030700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3101726-3111725 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303331 5265 Fabidae View MSA
124066124 5270 Rosid View MSA
123740868 5271 Pentapetalae View MSA
122787151 5272 Eudicot View MSA
122046493 5273 Angiosperm View MSA
121346121 5274 Embryophyte View MSA
123425222 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.65573 0.0 11.693   Low
cufflinks 8.89825 0.0 25.206    
cufflinks 4.93508 0.0 17.1228    
cufflinks 3.78289 0.0 12.2069   Low
cufflinks 4.54909 0.0 14.1759    
cufflinks 4.00439 0.0 12.5293    
cufflinks 7.12671 0.0 23.8131    
cufflinks 9.1098 0.0 29.4434    
cufflinks 6.87356 0.0 20.0146    
cufflinks 13.7986 0.0 44.1337   High
cufflinks 4.24258 0.0 15.4728    

0 Strain