Gene : Phvul.002G034700 P. vulgaris v2.1
Defline:  (1 of 1) K03678 - exosome complex component RRP45 (RRP45, EXOSC9) Genomic Order:  346
Name:  ? Phvul.002G034700 Secondary Identifier:  ? PAC:37177040
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G034700 0.5kb upstream 0.5kb upstream 3466 true Chr02: 3454389-3457854 Phaseolus vulgaris
Phvul.002G034700 0.5kb upstream 0.5kb upstream 500 false Chr02: 3457355-3457854 Phaseolus vulgaris
Phvul.002G034700 0.5kb downstream 0.5kb downstream 3466 true Chr02: 3453889-3457354 Phaseolus vulgaris
Phvul.002G034700 0.5kb downstream 0.5kb downstream 500 false Chr02: 3453889-3454388 Phaseolus vulgaris
Phvul.002G034700 1.0kb upstream 1.0kb upstream 3966 true Chr02: 3454389-3458354 Phaseolus vulgaris
Phvul.002G034700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3457355-3458354 Phaseolus vulgaris
Phvul.002G034700 1.0kb downstream 1.0kb downstream 3966 true Chr02: 3453389-3457354 Phaseolus vulgaris
Phvul.002G034700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3453389-3454388 Phaseolus vulgaris
Phvul.002G034700 2.0kb upstream 2.0kb upstream 4966 true Chr02: 3454389-3459354 Phaseolus vulgaris
Phvul.002G034700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3457355-3459354 Phaseolus vulgaris
Phvul.002G034700 2.0kb downstream 2.0kb downstream 4966 true Chr02: 3452389-3457354 Phaseolus vulgaris
Phvul.002G034700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3452389-3454388 Phaseolus vulgaris
Phvul.002G034700 5.0kb upstream 5.0kb upstream 7966 true Chr02: 3454389-3462354 Phaseolus vulgaris
Phvul.002G034700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3457355-3462354 Phaseolus vulgaris
Phvul.002G034700 5.0kb downstream 5.0kb downstream 7966 true Chr02: 3449389-3457354 Phaseolus vulgaris
Phvul.002G034700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3449389-3454388 Phaseolus vulgaris
Phvul.002G034700 10.0kb upstream 10.0kb upstream 12966 true Chr02: 3454389-3467354 Phaseolus vulgaris
Phvul.002G034700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3457355-3467354 Phaseolus vulgaris
Phvul.002G034700 10.0kb downstream 10.0kb downstream 12966 true Chr02: 3444389-3457354 Phaseolus vulgaris
Phvul.002G034700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3444389-3454388 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040877 5273 Angiosperm View MSA
122303739 5265 Fabidae View MSA
124064668 5270 Rosid View MSA
123744481 5271 Pentapetalae View MSA
122787002 5272 Eudicot View MSA
121343875 5274 Embryophyte View MSA
123425842 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.45191 0.0 15.3735   Low
cufflinks 13.2358 0.0 34.8292   High
cufflinks 7.35004 0.0 20.2901    
cufflinks 6.13414 0.0 17.1039   Low
cufflinks 10.7077 0.0 28.5459    
cufflinks 8.61082 0.0 23.3837    
cufflinks 11.4275 0.0 30.1709    
cufflinks 12.7067 0.0 33.4319    
cufflinks 10.9366 0.0 29.0065    
cufflinks 14.043 0.0 36.8381   High
cufflinks 9.9642 0.0 26.6705    

0 Strain