Gene : Phvul.002G021300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13391 - TUBULIN-RELATED PROTEIN Genomic Order:  211
Name:  ? Phvul.002G021300 Secondary Identifier:  ? PAC:37177615
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G021300 0.5kb upstream 0.5kb upstream 6778 true Chr02: 2271242-2278019 Phaseolus vulgaris
Phvul.002G021300 0.5kb upstream 0.5kb upstream 500 false Chr02: 2277520-2278019 Phaseolus vulgaris
Phvul.002G021300 0.5kb downstream 0.5kb downstream 6778 true Chr02: 2270742-2277519 Phaseolus vulgaris
Phvul.002G021300 0.5kb downstream 0.5kb downstream 500 false Chr02: 2270742-2271241 Phaseolus vulgaris
Phvul.002G021300 1.0kb upstream 1.0kb upstream 7278 true Chr02: 2271242-2278519 Phaseolus vulgaris
Phvul.002G021300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2277520-2278519 Phaseolus vulgaris
Phvul.002G021300 1.0kb downstream 1.0kb downstream 7278 true Chr02: 2270242-2277519 Phaseolus vulgaris
Phvul.002G021300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2270242-2271241 Phaseolus vulgaris
Phvul.002G021300 2.0kb upstream 2.0kb upstream 8278 true Chr02: 2271242-2279519 Phaseolus vulgaris
Phvul.002G021300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2277520-2279519 Phaseolus vulgaris
Phvul.002G021300 2.0kb downstream 2.0kb downstream 8278 true Chr02: 2269242-2277519 Phaseolus vulgaris
Phvul.002G021300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2269242-2271241 Phaseolus vulgaris
Phvul.002G021300 5.0kb upstream 5.0kb upstream 11278 true Chr02: 2271242-2282519 Phaseolus vulgaris
Phvul.002G021300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2277520-2282519 Phaseolus vulgaris
Phvul.002G021300 5.0kb downstream 5.0kb downstream 11278 true Chr02: 2266242-2277519 Phaseolus vulgaris
Phvul.002G021300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2266242-2271241 Phaseolus vulgaris
Phvul.002G021300 10.0kb upstream 10.0kb upstream 16278 true Chr02: 2271242-2287519 Phaseolus vulgaris
Phvul.002G021300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2277520-2287519 Phaseolus vulgaris
Phvul.002G021300 10.0kb downstream 10.0kb downstream 16278 true Chr02: 2261242-2277519 Phaseolus vulgaris
Phvul.002G021300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2261242-2271241 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306217 5265 Fabidae View MSA
124066645 5270 Rosid View MSA
123741201 5271 Pentapetalae View MSA
122788298 5272 Eudicot View MSA
122047686 5273 Angiosperm View MSA
121346251 5274 Embryophyte View MSA
123424627 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.27606 0.0 14.0936    
cufflinks 5.38739 0.0 20.685    
cufflinks 2.40678 0.0 9.57177   Low
cufflinks 2.8357 0.0 12.9569    
cufflinks 4.7475 0.0 18.8586    
cufflinks 3.80818 0.0 16.0148    
cufflinks 4.19063 0.0 17.1596    
cufflinks 3.99378 0.0 16.4192    
cufflinks 3.87716 0.0 16.2264    
cufflinks 9.94494 0.0 33.8622   High
cufflinks 3.32029 0.0 14.8126    

0 Strain