Gene : Phvul.002G024600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22884:SF299 - HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 Genomic Order:  244
Name:  ? Phvul.002G024600 Secondary Identifier:  ? PAC:37177018
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G024600 0.5kb upstream 0.5kb upstream 14983 true Chr02: 2533059-2548041 Phaseolus vulgaris
Phvul.002G024600 0.5kb upstream 0.5kb upstream 500 false Chr02: 2533059-2533558 Phaseolus vulgaris
Phvul.002G024600 0.5kb downstream 0.5kb downstream 14983 true Chr02: 2533559-2548541 Phaseolus vulgaris
Phvul.002G024600 0.5kb downstream 0.5kb downstream 500 false Chr02: 2548042-2548541 Phaseolus vulgaris
Phvul.002G024600 1.0kb upstream 1.0kb upstream 15483 true Chr02: 2532559-2548041 Phaseolus vulgaris
Phvul.002G024600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2532559-2533558 Phaseolus vulgaris
Phvul.002G024600 1.0kb downstream 1.0kb downstream 15483 true Chr02: 2533559-2549041 Phaseolus vulgaris
Phvul.002G024600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2548042-2549041 Phaseolus vulgaris
Phvul.002G024600 2.0kb upstream 2.0kb upstream 16483 true Chr02: 2531559-2548041 Phaseolus vulgaris
Phvul.002G024600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2531559-2533558 Phaseolus vulgaris
Phvul.002G024600 2.0kb downstream 2.0kb downstream 16483 true Chr02: 2533559-2550041 Phaseolus vulgaris
Phvul.002G024600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2548042-2550041 Phaseolus vulgaris
Phvul.002G024600 5.0kb upstream 5.0kb upstream 19483 true Chr02: 2528559-2548041 Phaseolus vulgaris
Phvul.002G024600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2528559-2533558 Phaseolus vulgaris
Phvul.002G024600 5.0kb downstream 5.0kb downstream 19483 true Chr02: 2533559-2553041 Phaseolus vulgaris
Phvul.002G024600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2548042-2553041 Phaseolus vulgaris
Phvul.002G024600 10.0kb upstream 10.0kb upstream 24483 true Chr02: 2523559-2548041 Phaseolus vulgaris
Phvul.002G024600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2523559-2533558 Phaseolus vulgaris
Phvul.002G024600 10.0kb downstream 10.0kb downstream 24483 true Chr02: 2533559-2558041 Phaseolus vulgaris
Phvul.002G024600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2548042-2558041 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307332 5265 Fabidae View MSA
124067135 5270 Rosid View MSA
123738516 5271 Pentapetalae View MSA
122791018 5272 Eudicot View MSA
122047705 5273 Angiosperm View MSA
121347776 5274 Embryophyte View MSA
123380624 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.947604 0.0 3.82733   Low
cufflinks 3.50529 0.0 10.7804    
cufflinks 3.43263 0.0 10.1708    
cufflinks 1.09952 0.0 4.34552   Low
cufflinks 2.50073 0.0 8.27625    
cufflinks 4.27422 0.0 14.2861    
cufflinks 3.91816 0.0 13.1933    
cufflinks 5.58593 0.0 15.9431   High
cufflinks 3.74996 0.0 11.4298    
cufflinks 5.28813 0.0 15.3472   High
cufflinks 2.43403 0.0 7.81274    

0 Strain