Gene : Phvul.002G027100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR30546:SF3 - MINOR ALLERGEN Genomic Order:  269
Name:  ? Phvul.002G027100 Secondary Identifier:  ? PAC:37176212
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G027100 0.5kb upstream 0.5kb upstream 2573 true Chr02: 2836263-2838835 Phaseolus vulgaris
Phvul.002G027100 0.5kb upstream 0.5kb upstream 500 false Chr02: 2838336-2838835 Phaseolus vulgaris
Phvul.002G027100 0.5kb downstream 0.5kb downstream 2573 true Chr02: 2835763-2838335 Phaseolus vulgaris
Phvul.002G027100 0.5kb downstream 0.5kb downstream 500 false Chr02: 2835763-2836262 Phaseolus vulgaris
Phvul.002G027100 1.0kb upstream 1.0kb upstream 3073 true Chr02: 2836263-2839335 Phaseolus vulgaris
Phvul.002G027100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2838336-2839335 Phaseolus vulgaris
Phvul.002G027100 1.0kb downstream 1.0kb downstream 3073 true Chr02: 2835263-2838335 Phaseolus vulgaris
Phvul.002G027100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2835263-2836262 Phaseolus vulgaris
Phvul.002G027100 2.0kb upstream 2.0kb upstream 4073 true Chr02: 2836263-2840335 Phaseolus vulgaris
Phvul.002G027100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2838336-2840335 Phaseolus vulgaris
Phvul.002G027100 2.0kb downstream 2.0kb downstream 4073 true Chr02: 2834263-2838335 Phaseolus vulgaris
Phvul.002G027100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2834263-2836262 Phaseolus vulgaris
Phvul.002G027100 5.0kb upstream 5.0kb upstream 7073 true Chr02: 2836263-2843335 Phaseolus vulgaris
Phvul.002G027100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2838336-2843335 Phaseolus vulgaris
Phvul.002G027100 5.0kb downstream 5.0kb downstream 7073 true Chr02: 2831263-2838335 Phaseolus vulgaris
Phvul.002G027100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2831263-2836262 Phaseolus vulgaris
Phvul.002G027100 10.0kb upstream 10.0kb upstream 12073 true Chr02: 2836263-2848335 Phaseolus vulgaris
Phvul.002G027100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2838336-2848335 Phaseolus vulgaris
Phvul.002G027100 10.0kb downstream 10.0kb downstream 12073 true Chr02: 2826263-2838335 Phaseolus vulgaris
Phvul.002G027100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2826263-2836262 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.8388 0.0 24.3684    
cufflinks 16.2727 0.0 42.896    
cufflinks 18.524 0.0 48.6354    
cufflinks 32.5359 0.0 84.111   High
cufflinks 14.0511 0.0 37.2658    
cufflinks 14.4673 0.0 38.4789    
cufflinks 7.62337 0.0 21.2474   Low
cufflinks 9.78212 0.0 26.8179    
cufflinks 7.61431 0.0 21.2641   Low
cufflinks 11.8132 0.0 31.8078    
cufflinks 17.9332 0.0 46.8829    

0 Strain