Gene : Phvul.002G027400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12300:SF47 - HVA22-LIKE PROTEIN K Genomic Order:  272
Name:  ? Phvul.002G027400 Secondary Identifier:  ? PAC:37176363
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G027400 0.5kb upstream 0.5kb upstream 4692 true Chr02: 2858527-2863218 Phaseolus vulgaris
Phvul.002G027400 0.5kb upstream 0.5kb upstream 500 false Chr02: 2862719-2863218 Phaseolus vulgaris
Phvul.002G027400 0.5kb downstream 0.5kb downstream 4692 true Chr02: 2858027-2862718 Phaseolus vulgaris
Phvul.002G027400 0.5kb downstream 0.5kb downstream 500 false Chr02: 2858027-2858526 Phaseolus vulgaris
Phvul.002G027400 1.0kb upstream 1.0kb upstream 5192 true Chr02: 2858527-2863718 Phaseolus vulgaris
Phvul.002G027400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2862719-2863718 Phaseolus vulgaris
Phvul.002G027400 1.0kb downstream 1.0kb downstream 5192 true Chr02: 2857527-2862718 Phaseolus vulgaris
Phvul.002G027400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2857527-2858526 Phaseolus vulgaris
Phvul.002G027400 2.0kb upstream 2.0kb upstream 6192 true Chr02: 2858527-2864718 Phaseolus vulgaris
Phvul.002G027400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2862719-2864718 Phaseolus vulgaris
Phvul.002G027400 2.0kb downstream 2.0kb downstream 6192 true Chr02: 2856527-2862718 Phaseolus vulgaris
Phvul.002G027400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2856527-2858526 Phaseolus vulgaris
Phvul.002G027400 5.0kb upstream 5.0kb upstream 9192 true Chr02: 2858527-2867718 Phaseolus vulgaris
Phvul.002G027400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2862719-2867718 Phaseolus vulgaris
Phvul.002G027400 5.0kb downstream 5.0kb downstream 9192 true Chr02: 2853527-2862718 Phaseolus vulgaris
Phvul.002G027400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2853527-2858526 Phaseolus vulgaris
Phvul.002G027400 10.0kb upstream 10.0kb upstream 14192 true Chr02: 2858527-2872718 Phaseolus vulgaris
Phvul.002G027400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2862719-2872718 Phaseolus vulgaris
Phvul.002G027400 10.0kb downstream 10.0kb downstream 14192 true Chr02: 2848527-2862718 Phaseolus vulgaris
Phvul.002G027400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2848527-2858526 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307036 5265 Fabidae View MSA
124070048 5270 Rosid View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4872 0.0 48.2437   High
cufflinks 14.3591 0.0 40.305    
cufflinks 11.5397 0.0 32.9625    
cufflinks 13.8762 0.0 39.0284    
cufflinks 12.0236 0.0 34.4579    
cufflinks 8.21842 0.0 24.4308   Low
cufflinks 12.3607 0.0 35.2207    
cufflinks 18.5241 0.0 50.8012   High
cufflinks 12.5841 0.0 35.7894    
cufflinks 17.8485 0.0 49.1309   High
cufflinks 14.4573 0.0 40.6724    

0 Strain