Gene : Phvul.002G014600 P. vulgaris v2.1
Defline:  (1 of 3) K04508 - transducin (beta)-like 1 (TBL1) Genomic Order:  144
Name:  ? Phvul.002G014600 Secondary Identifier:  ? PAC:37174504
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G014600 0.5kb upstream 0.5kb upstream 10740 true Chr02: 1605422-1616161 Phaseolus vulgaris
Phvul.002G014600 0.5kb upstream 0.5kb upstream 500 false Chr02: 1615662-1616161 Phaseolus vulgaris
Phvul.002G014600 0.5kb downstream 0.5kb downstream 10740 true Chr02: 1604922-1615661 Phaseolus vulgaris
Phvul.002G014600 0.5kb downstream 0.5kb downstream 500 false Chr02: 1604922-1605421 Phaseolus vulgaris
Phvul.002G014600 1.0kb upstream 1.0kb upstream 11240 true Chr02: 1605422-1616661 Phaseolus vulgaris
Phvul.002G014600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1615662-1616661 Phaseolus vulgaris
Phvul.002G014600 1.0kb downstream 1.0kb downstream 11240 true Chr02: 1604422-1615661 Phaseolus vulgaris
Phvul.002G014600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1604422-1605421 Phaseolus vulgaris
Phvul.002G014600 2.0kb upstream 2.0kb upstream 12240 true Chr02: 1605422-1617661 Phaseolus vulgaris
Phvul.002G014600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1615662-1617661 Phaseolus vulgaris
Phvul.002G014600 2.0kb downstream 2.0kb downstream 12240 true Chr02: 1603422-1615661 Phaseolus vulgaris
Phvul.002G014600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1603422-1605421 Phaseolus vulgaris
Phvul.002G014600 5.0kb upstream 5.0kb upstream 15240 true Chr02: 1605422-1620661 Phaseolus vulgaris
Phvul.002G014600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1615662-1620661 Phaseolus vulgaris
Phvul.002G014600 5.0kb downstream 5.0kb downstream 15240 true Chr02: 1600422-1615661 Phaseolus vulgaris
Phvul.002G014600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1600422-1605421 Phaseolus vulgaris
Phvul.002G014600 10.0kb upstream 10.0kb upstream 20240 true Chr02: 1605422-1625661 Phaseolus vulgaris
Phvul.002G014600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1615662-1625661 Phaseolus vulgaris
Phvul.002G014600 10.0kb downstream 10.0kb downstream 20240 true Chr02: 1595422-1615661 Phaseolus vulgaris
Phvul.002G014600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1595422-1605421 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310546 5265 Fabidae View MSA
124060920 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43374 0.0 4.99047    
cufflinks 4.04049 0.0 13.8025   High
cufflinks 1.36795 0.0 4.80432    
cufflinks 0.847226 0.0 3.48275   Low
cufflinks 1.27918 0.0 4.73866    
cufflinks 2.07781 0.0 6.76046    
cufflinks 2.55962 0.0 10.6196    
cufflinks 2.13442 0.0 6.79673    
cufflinks 1.12219 0.0 4.15683    
cufflinks 4.00121 0.0 16.7774   High
cufflinks 1.66803 0.0 5.78282    

0 Strain