Gene : Phvul.002G005100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Genomic Order:  49
Name:  ? Phvul.002G005100 Secondary Identifier:  ? PAC:37176642
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G005100 0.5kb upstream 0.5kb upstream 5973 true Chr02: 559445-565417 Phaseolus vulgaris
Phvul.002G005100 0.5kb upstream 0.5kb upstream 500 false Chr02: 559445-559944 Phaseolus vulgaris
Phvul.002G005100 0.5kb downstream 0.5kb downstream 5973 true Chr02: 559945-565917 Phaseolus vulgaris
Phvul.002G005100 0.5kb downstream 0.5kb downstream 500 false Chr02: 565418-565917 Phaseolus vulgaris
Phvul.002G005100 1.0kb upstream 1.0kb upstream 6473 true Chr02: 558945-565417 Phaseolus vulgaris
Phvul.002G005100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 558945-559944 Phaseolus vulgaris
Phvul.002G005100 1.0kb downstream 1.0kb downstream 6473 true Chr02: 559945-566417 Phaseolus vulgaris
Phvul.002G005100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 565418-566417 Phaseolus vulgaris
Phvul.002G005100 2.0kb upstream 2.0kb upstream 7473 true Chr02: 557945-565417 Phaseolus vulgaris
Phvul.002G005100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 557945-559944 Phaseolus vulgaris
Phvul.002G005100 2.0kb downstream 2.0kb downstream 7473 true Chr02: 559945-567417 Phaseolus vulgaris
Phvul.002G005100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 565418-567417 Phaseolus vulgaris
Phvul.002G005100 5.0kb upstream 5.0kb upstream 10473 true Chr02: 554945-565417 Phaseolus vulgaris
Phvul.002G005100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 554945-559944 Phaseolus vulgaris
Phvul.002G005100 5.0kb downstream 5.0kb downstream 10473 true Chr02: 559945-570417 Phaseolus vulgaris
Phvul.002G005100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 565418-570417 Phaseolus vulgaris
Phvul.002G005100 10.0kb upstream 10.0kb upstream 15473 true Chr02: 549945-565417 Phaseolus vulgaris
Phvul.002G005100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 549945-559944 Phaseolus vulgaris
Phvul.002G005100 10.0kb downstream 10.0kb downstream 15473 true Chr02: 559945-575417 Phaseolus vulgaris
Phvul.002G005100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 565418-575417 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314300 5265 Fabidae View MSA
124065519 5270 Rosid View MSA
123751107 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9157 0.0 60.3623    
cufflinks 12.3919 0.0 44.6304    
cufflinks 15.9356 0.0 47.2474    
cufflinks 30.9346 0.0 99.5571   High
cufflinks 13.6053 0.0 41.6832    
cufflinks 12.6613 0.0 39.1481    
cufflinks 15.6433 0.0 53.5793    
cufflinks 13.077 0.0 46.2289    
cufflinks 22.198 0.0 72.6833   High
cufflinks 10.8025 0.0 34.1211   Low
cufflinks 11.5142 0.0 36.2762    

0 Strain