Gene : Phvul.002G008200 P. vulgaris v2.1
Defline:  (1 of 1) 2.8.1.6//2.8.1.7 - Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  79
Name:  ? Phvul.002G008200 Secondary Identifier:  ? PAC:37178518
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1021 Phaseolus vulgaris pathologic  
Pvulgaris PWY0-1507 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6823 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7250 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G008200 0.5kb upstream 0.5kb upstream 2921 true Chr02: 891473-894393 Phaseolus vulgaris
Phvul.002G008200 0.5kb upstream 0.5kb upstream 500 false Chr02: 891473-891972 Phaseolus vulgaris
Phvul.002G008200 0.5kb downstream 0.5kb downstream 2921 true Chr02: 891973-894893 Phaseolus vulgaris
Phvul.002G008200 0.5kb downstream 0.5kb downstream 500 false Chr02: 894394-894893 Phaseolus vulgaris
Phvul.002G008200 1.0kb upstream 1.0kb upstream 3421 true Chr02: 890973-894393 Phaseolus vulgaris
Phvul.002G008200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 890973-891972 Phaseolus vulgaris
Phvul.002G008200 1.0kb downstream 1.0kb downstream 3421 true Chr02: 891973-895393 Phaseolus vulgaris
Phvul.002G008200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 894394-895393 Phaseolus vulgaris
Phvul.002G008200 2.0kb upstream 2.0kb upstream 4421 true Chr02: 889973-894393 Phaseolus vulgaris
Phvul.002G008200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 889973-891972 Phaseolus vulgaris
Phvul.002G008200 2.0kb downstream 2.0kb downstream 4421 true Chr02: 891973-896393 Phaseolus vulgaris
Phvul.002G008200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 894394-896393 Phaseolus vulgaris
Phvul.002G008200 5.0kb upstream 5.0kb upstream 7421 true Chr02: 886973-894393 Phaseolus vulgaris
Phvul.002G008200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 886973-891972 Phaseolus vulgaris
Phvul.002G008200 5.0kb downstream 5.0kb downstream 7421 true Chr02: 891973-899393 Phaseolus vulgaris
Phvul.002G008200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 894394-899393 Phaseolus vulgaris
Phvul.002G008200 10.0kb upstream 10.0kb upstream 12421 true Chr02: 881973-894393 Phaseolus vulgaris
Phvul.002G008200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 881973-891972 Phaseolus vulgaris
Phvul.002G008200 10.0kb downstream 10.0kb downstream 12421 true Chr02: 891973-904393 Phaseolus vulgaris
Phvul.002G008200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 894394-904393 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306669 5265 Fabidae View MSA
124069131 5270 Rosid View MSA
123740340 5271 Pentapetalae View MSA
122791937 5272 Eudicot View MSA
122047383 5273 Angiosperm View MSA
121345399 5274 Embryophyte View MSA
123425014 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.2613 0.0 154.708 High  
cufflinks 52.7962 0.0 146.927 High  
cufflinks 36.2396 0.0 97.0679    
cufflinks 76.3208 0.0 219.892 High High
cufflinks 61.0598 0.0 172.399 High  
cufflinks 38.9118 0.0 105.122 High  
cufflinks 26.3997 0.0 69.5378   Low
cufflinks 19.2227 0.0 49.8818   Low
cufflinks 38.5316 0.0 104.16 High  
cufflinks 102.191 0.0 310.177 High High
cufflinks 54.2099 0.0 151.654 High  

0 Strain