Gene : Phvul.002G005700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11654:SF121 - PROTEIN NRT1/ PTR FAMILY 7.3 Genomic Order:  54
Name:  ? Phvul.002G005700 Secondary Identifier:  ? PAC:37174513
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G005700 0.5kb upstream 0.5kb upstream 6478 true Chr02: 597351-603828 Phaseolus vulgaris
Phvul.002G005700 0.5kb upstream 0.5kb upstream 500 false Chr02: 603329-603828 Phaseolus vulgaris
Phvul.002G005700 0.5kb downstream 0.5kb downstream 6478 true Chr02: 596851-603328 Phaseolus vulgaris
Phvul.002G005700 0.5kb downstream 0.5kb downstream 500 false Chr02: 596851-597350 Phaseolus vulgaris
Phvul.002G005700 1.0kb upstream 1.0kb upstream 6978 true Chr02: 597351-604328 Phaseolus vulgaris
Phvul.002G005700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 603329-604328 Phaseolus vulgaris
Phvul.002G005700 1.0kb downstream 1.0kb downstream 6978 true Chr02: 596351-603328 Phaseolus vulgaris
Phvul.002G005700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 596351-597350 Phaseolus vulgaris
Phvul.002G005700 2.0kb upstream 2.0kb upstream 7978 true Chr02: 597351-605328 Phaseolus vulgaris
Phvul.002G005700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 603329-605328 Phaseolus vulgaris
Phvul.002G005700 2.0kb downstream 2.0kb downstream 7978 true Chr02: 595351-603328 Phaseolus vulgaris
Phvul.002G005700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 595351-597350 Phaseolus vulgaris
Phvul.002G005700 5.0kb upstream 5.0kb upstream 10978 true Chr02: 597351-608328 Phaseolus vulgaris
Phvul.002G005700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 603329-608328 Phaseolus vulgaris
Phvul.002G005700 5.0kb downstream 5.0kb downstream 10978 true Chr02: 592351-603328 Phaseolus vulgaris
Phvul.002G005700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 592351-597350 Phaseolus vulgaris
Phvul.002G005700 10.0kb upstream 10.0kb upstream 15978 true Chr02: 597351-613328 Phaseolus vulgaris
Phvul.002G005700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 603329-613328 Phaseolus vulgaris
Phvul.002G005700 10.0kb downstream 10.0kb downstream 15978 true Chr02: 587351-603328 Phaseolus vulgaris
Phvul.002G005700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 587351-597350 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311036 5265 Fabidae View MSA
124068315 5270 Rosid View MSA
123746803 5271 Pentapetalae View MSA
122794508 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.939 0.0 125.365 High High
cufflinks 1.12999 0.0 3.73564    
cufflinks 0.0748691 0.0 0.314352 Low Low
cufflinks 28.7282 0.0 74.5122   High
cufflinks 0.178518 0.0 0.702866 Low  
cufflinks 0.171858 0.0 0.676537 Low  
cufflinks 4.3018 0.0 12.248    
cufflinks 10.3697 0.0 27.3349    
cufflinks 7.00738 0.0 19.1271    
cufflinks 0.0465826 0.0 0.205184 Low Low
cufflinks 0.0777045 0.0 0.327676 Low Low

0 Strain