Gene : Phvul.001G251600 P. vulgaris v2.1
Defline:  (1 of 39) PF05678 - VQ motif (VQ) Genomic Order:  2496
Name:  ? Phvul.001G251600 Secondary Identifier:  ? PAC:37171049
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G251600 0.5kb upstream 0.5kb upstream 3368 true Chr01: 50208578-50211945 Phaseolus vulgaris
Phvul.001G251600 0.5kb upstream 0.5kb upstream 500 false Chr01: 50208578-50209077 Phaseolus vulgaris
Phvul.001G251600 0.5kb downstream 0.5kb downstream 3368 true Chr01: 50209078-50212445 Phaseolus vulgaris
Phvul.001G251600 0.5kb downstream 0.5kb downstream 500 false Chr01: 50211946-50212445 Phaseolus vulgaris
Phvul.001G251600 1.0kb upstream 1.0kb upstream 3868 true Chr01: 50208078-50211945 Phaseolus vulgaris
Phvul.001G251600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50208078-50209077 Phaseolus vulgaris
Phvul.001G251600 1.0kb downstream 1.0kb downstream 3868 true Chr01: 50209078-50212945 Phaseolus vulgaris
Phvul.001G251600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50211946-50212945 Phaseolus vulgaris
Phvul.001G251600 2.0kb upstream 2.0kb upstream 4868 true Chr01: 50207078-50211945 Phaseolus vulgaris
Phvul.001G251600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50207078-50209077 Phaseolus vulgaris
Phvul.001G251600 2.0kb downstream 2.0kb downstream 4868 true Chr01: 50209078-50213945 Phaseolus vulgaris
Phvul.001G251600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50211946-50213945 Phaseolus vulgaris
Phvul.001G251600 5.0kb upstream 5.0kb upstream 7868 true Chr01: 50204078-50211945 Phaseolus vulgaris
Phvul.001G251600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50204078-50209077 Phaseolus vulgaris
Phvul.001G251600 5.0kb downstream 5.0kb downstream 7868 true Chr01: 50209078-50216945 Phaseolus vulgaris
Phvul.001G251600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50211946-50216945 Phaseolus vulgaris
Phvul.001G251600 10.0kb upstream 10.0kb upstream 12868 true Chr01: 50199078-50211945 Phaseolus vulgaris
Phvul.001G251600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50199078-50209077 Phaseolus vulgaris
Phvul.001G251600 10.0kb downstream 10.0kb downstream 12868 true Chr01: 50209078-50221945 Phaseolus vulgaris
Phvul.001G251600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50211946-50221945 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311047 5265 Fabidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.39967 0.0 17.3914    
cufflinks 9.03251 0.0 23.9324    
cufflinks 4.89124 0.0 13.6184   Low
cufflinks 3.92655 0.0 11.1103   Low
cufflinks 15.435 0.0 39.9592    
cufflinks 6.6098 0.0 17.9297    
cufflinks 14.4582 0.0 37.437    
cufflinks 28.5635 0.0 74.5472 High High
cufflinks 6.02963 0.0 16.4142    
cufflinks 28.8568 0.0 75.1878   High
cufflinks 17.3212 0.0 44.7873    

0 Strain