Gene : Phvul.001G255300 P. vulgaris v2.1
Defline:  (1 of 10) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  2534
Name:  ? Phvul.001G255300 Secondary Identifier:  ? PAC:37170974
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G255300 0.5kb upstream 0.5kb upstream 5462 true Chr01: 50477799-50483260 Phaseolus vulgaris
Phvul.001G255300 0.5kb upstream 0.5kb upstream 500 false Chr01: 50482761-50483260 Phaseolus vulgaris
Phvul.001G255300 0.5kb downstream 0.5kb downstream 5462 true Chr01: 50477299-50482760 Phaseolus vulgaris
Phvul.001G255300 0.5kb downstream 0.5kb downstream 500 false Chr01: 50477299-50477798 Phaseolus vulgaris
Phvul.001G255300 1.0kb upstream 1.0kb upstream 5962 true Chr01: 50477799-50483760 Phaseolus vulgaris
Phvul.001G255300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50482761-50483760 Phaseolus vulgaris
Phvul.001G255300 1.0kb downstream 1.0kb downstream 5962 true Chr01: 50476799-50482760 Phaseolus vulgaris
Phvul.001G255300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50476799-50477798 Phaseolus vulgaris
Phvul.001G255300 2.0kb upstream 2.0kb upstream 6962 true Chr01: 50477799-50484760 Phaseolus vulgaris
Phvul.001G255300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50482761-50484760 Phaseolus vulgaris
Phvul.001G255300 2.0kb downstream 2.0kb downstream 6962 true Chr01: 50475799-50482760 Phaseolus vulgaris
Phvul.001G255300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50475799-50477798 Phaseolus vulgaris
Phvul.001G255300 5.0kb upstream 5.0kb upstream 9962 true Chr01: 50477799-50487760 Phaseolus vulgaris
Phvul.001G255300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50482761-50487760 Phaseolus vulgaris
Phvul.001G255300 5.0kb downstream 5.0kb downstream 9962 true Chr01: 50472799-50482760 Phaseolus vulgaris
Phvul.001G255300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50472799-50477798 Phaseolus vulgaris
Phvul.001G255300 10.0kb upstream 10.0kb upstream 14962 true Chr01: 50477799-50492760 Phaseolus vulgaris
Phvul.001G255300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50482761-50492760 Phaseolus vulgaris
Phvul.001G255300 10.0kb downstream 10.0kb downstream 14962 true Chr01: 50467799-50482760 Phaseolus vulgaris
Phvul.001G255300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50467799-50477798 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314798 5265 Fabidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4003 0.0 34.8067    
cufflinks 8.4703 0.0 29.8578    
cufflinks 13.4859 0.0 39.5388    
cufflinks 18.8886 0.0 53.8024   High
cufflinks 10.7588 0.0 32.6386    
cufflinks 9.97376 0.0 29.5745    
cufflinks 14.0866 0.0 40.84    
cufflinks 7.73689 0.0 24.5446   Low
cufflinks 5.76614 0.0 19.0829   Low
cufflinks 12.0451 0.0 40.2353    
cufflinks 15.8063 0.0 51.0457   High

0 Strain